RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W AHP1P38013 176 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W MRP21P38175 177 aa5.93□□□□□ -1.46
RPN11YFR004W YBR238CP38330 731 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W BEM4P39011 633 aa5.93□□□□□ -1.46
RPN11YFR004W MPH1P40562 993 aa5.93□□□□□ -1.46
RPN11YFR004W SNG1P46950 547 aa5.93□□□□□ -1.46
RPN11YFR004W MRX6P48564 524 aa5.93□□□□□ -1.46
RPN11YFR004W PRP24P49960 444 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W DCP2P53550 970 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W NRM1P53718 249 aa5.93□□□□□ -1.46
RPN11YFR004W ARC35P53731 342 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W TRM112P53738 135 aaPredicted RBP5.93□□□□□ -1.46
RPN11YFR004W SWS2P53937 143 aa5.93□□□□□ -1.46
RPN11YFR004W YNL058CP53947 316 aa5.93□□□□□ -1.46
RPN11YFR004W LSM3P57743 89 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W ADE12P80210 433 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W REG1Q00816 1014 aa5.93□□□□□ -1.46
RPN11YFR004W SKI8Q02793 397 aaPredicted RBP5.93□□□□□ -1.46
RPN11YFR004W DYN3Q04949 312 aa5.93□□□□□ -1.46
RPN11YFR004W YLR456WQ06199 204 aa5.93□□□□□ -1.46
RPN11YFR004W YLR012CQ07927 99 aa5.93□□□□□ -1.46
RPN11YFR004W YEH2Q07950 538 aa5.93□□□□□ -1.46
RPN11YFR004W DBP10Q12389 995 aaKnown RBP5.93□□□□□ -1.46
RPN11YFR004W YPL247CQ12523 523 aa5.93□□□□□ -1.46
RPN11YFR004W HSH49Q99181 213 aaPredicted RBP5.93□□□□□ -1.46
RPN11YFR004W TRP3P00937 484 aa5.92□□□□□ -1.46
RPN11YFR004W RIP1P08067 215 aa5.92□□□□□ -1.46
RPN11YFR004W SUI3P09064 285 aaKnown RBP5.92□□□□□ -1.46
RPN11YFR004W NMT1P14743 455 aa5.92□□□□□ -1.46
RPN11YFR004W PEX6P33760 1030 aa5.92□□□□□ -1.46
RPN11YFR004W YBL029WP38201 376 aa5.92□□□□□ -1.46
RPN11YFR004W AMN1P38285 549 aaPredicted RBP5.92□□□□□ -1.46
RPN11YFR004W UTP9P38882 575 aaKnown RBP5.92□□□□□ -1.46
RPN11YFR004W SEO1P39709 593 aa5.92□□□□□ -1.46
RPN11YFR004W LTP1P40347 161 aa5.92□□□□□ -1.46
RPN11YFR004W ALR2P43553 858 aa5.92□□□□□ -1.46
RPN11YFR004W FMP32P43557 207 aa5.92□□□□□ -1.46
RPN11YFR004W BST1P43571 1029 aa5.92□□□□□ -1.46
RPN11YFR004W YJR154WP47181 346 aa5.92□□□□□ -1.46
RPN11YFR004W SUN4P53616 420 aa5.92□□□□□ -1.46
RPN11YFR004W RMI1Q02685 241 aa5.92□□□□□ -1.46
RPN11YFR004W YPL113CQ02961 396 aa5.92□□□□□ -1.46
RPN11YFR004W TAF12Q03761 539 aa5.92□□□□□ -1.46
RPN11YFR004W TRM82Q03774 444 aa5.92□□□□□ -1.46
RPN11YFR004W INP2Q03824 705 aa5.92□□□□□ -1.46
RPN11YFR004W YFT2Q06676 274 aa5.92□□□□□ -1.46
RPN11YFR004W TRE2Q08693 809 aa5.92□□□□□ -1.46
RPN11YFR004W YIG1Q08956 461 aa5.92□□□□□ -1.46
RPN11YFR004W SLF1Q12034 447 aaKnown RBP5.92□□□□□ -1.46
RPN11YFR004W YPL066WQ12194 479 aa5.92□□□□□ -1.46
RPN11YFR004W MDY2Q12285 212 aa5.92□□□□□ -1.46
RPN11YFR004W YVC1Q12324 675 aa5.92□□□□□ -1.46
RPN11YFR004W TMA17Q12513 150 aa5.92□□□□□ -1.46
RPN11YFR004W NAG1Q8TGN9 163 aa5.92□□□□□ -1.46
RPN11YFR004W SEC53P07283 254 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W RPL1AP0CX43 217 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W RPL1BP0CX44 217 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W ABF1P14164 731 aa5.91□□□□□ -1.46
RPN11YFR004W TAL1P15019 335 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W CCA1P21269 546 aa5.91□□□□□ -1.46
RPN11YFR004W YSP3P25036 478 aa5.91□□□□□ -1.46
RPN11YFR004W YCR090CP25654 182 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W MKK2P32491 506 aa5.91□□□□□ -1.46
RPN11YFR004W NGG1P32494 702 aa5.91□□□□□ -1.46
RPN11YFR004W TDP1P38319 544 aa5.91□□□□□ -1.46
RPN11YFR004W ARN1P38731 627 aa5.91□□□□□ -1.46
RPN11YFR004W ELO3P40319 345 aa5.91□□□□□ -1.46
RPN11YFR004W COA1P40452 197 aa5.91□□□□□ -1.46
RPN11YFR004W SEC28P40509 296 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W FET5P43561 622 aa5.91□□□□□ -1.46
RPN11YFR004W VMA10P48836 114 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W MRK1P50873 501 aa5.91□□□□□ -1.46
RPN11YFR004W GET1P53192 235 aa5.91□□□□□ -1.46
RPN11YFR004W CSL4P53859 292 aaPredicted RBP5.91□□□□□ -1.46
RPN11YFR004W CDC14Q00684 551 aa5.91□□□□□ -1.46
RPN11YFR004W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
RPN11YFR004W MET14Q02196 202 aa5.91□□□□□ -1.46
RPN11YFR004W NUP100Q02629 959 aa5.91□□□□□ -1.46
RPN11YFR004W GRX8Q05926 109 aa5.91□□□□□ -1.46
RPN11YFR004W RPN8Q08723 338 aaKnown RBP5.91□□□□□ -1.46
RPN11YFR004W HUA2Q12134 243 aa5.91□□□□□ -1.46
RPN11YFR004W TY1A-BLQ12266 440 aa5.91□□□□□ -1.46
RPN11YFR004W ATR1P13090 542 aa5.9□□□□□ -1.46
RPN11YFR004W AMD1P15274 810 aaKnown RBP5.9□□□□□ -1.46
RPN11YFR004W STE4P18851 423 aa5.9□□□□□ -1.46
RPN11YFR004W ACO1P19414 778 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
RPN11YFR004W TYR1P20049 452 aa5.9□□□□□ -1.46
RPN11YFR004W CLN1P20437 546 aa5.9□□□□□ -1.46
RPN11YFR004W MSB1P21339 1137 aaKnown RBP5.9□□□□□ -1.46
RPN11YFR004W DAL81P21657 970 aa5.9□□□□□ -1.46
RPN11YFR004W TRX2P22803 104 aaKnown RBP5.9□□□□□ -1.46
RPN11YFR004W YCR099CP25657 155 aa5.9□□□□□ -1.46
RPN11YFR004W HBS1P32769 611 aaKnown RBP5.9□□□□□ -1.46
RPN11YFR004W PTM1P32857 523 aa5.9□□□□□ -1.46
RPN11YFR004W YKL151CP36059 337 aa5.9□□□□□ -1.46
RPN11YFR004W ECM4P36156 370 aa5.9□□□□□ -1.46
RPN11YFR004W KAP104P38217 918 aaKnown RBP5.9□□□□□ -1.46
RPN11YFR004W YBR259WP38338 688 aa5.9□□□□□ -1.46
RPN11YFR004W MBP1P39678 833 aa5.9□□□□□ -1.46
RPN11YFR004W ARB1P40024 610 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms