RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C MRH1Q12117 320 aaPredicted RBP4.05□□□□□ -1.76
SPB4YFL002C GPH1P06738 902 aaKnown RBP4.04□□□□□ -1.76
SPB4YFL002C CBP1P07252 654 aa4.04□□□□□ -1.76
SPB4YFL002C CTS1P29029 562 aa4.04□□□□□ -1.76
SPB4YFL002C MTR2P34232 184 aaKnown RBP4.04□□□□□ -1.76
SPB4YFL002C ARA1P38115 344 aa4.04□□□□□ -1.76
SPB4YFL002C MLH1P38920 769 aa4.04□□□□□ -1.76
SPB4YFL002C OSW5P40219 148 aa4.04□□□□□ -1.76
SPB4YFL002C YTA12P40341 825 aa4.04□□□□□ -1.76
SPB4YFL002C CDC1P40986 491 aa4.04□□□□□ -1.76
SPB4YFL002C EPL1P43572 832 aa4.04□□□□□ -1.76
SPB4YFL002C YGL108CP53139 140 aa4.04□□□□□ -1.76
SPB4YFL002C MUK1Q02866 612 aa4.04□□□□□ -1.76
SPB4YFL002C YMR206WQ03695 313 aa4.04□□□□□ -1.76
SPB4YFL002C RLP24Q07915 199 aaKnown RBP4.04□□□□□ -1.76
SPB4YFL002C APL5Q08951 932 aaKnown RBP4.04□□□□□ -1.76
SPB4YFL002C YLR049CQ12110 428 aa4.04□□□□□ -1.76
SPB4YFL002C VAM3Q12241 283 aa4.04□□□□□ -1.76
SPB4YFL002C TFB5Q3E7C1 72 aaPredicted RBP4.04□□□□□ -1.76
SPB4YFL002C ADE5,7P07244 802 aaKnown RBP4.03□□□□□ -1.76
SPB4YFL002C RNQ1P25367 405 aa4.03□□□□□ -1.76
SPB4YFL002C HIR2P32480 875 aa4.03□□□□□ -1.76
SPB4YFL002C MRPL4P36517 319 aa4.03□□□□□ -1.76
SPB4YFL002C YIL089WP40500 205 aa4.03□□□□□ -1.76
SPB4YFL002C ALK1P43633 760 aaKnown RBP4.03□□□□□ -1.76
SPB4YFL002C CUE3P53137 624 aaKnown RBP4.03□□□□□ -1.76
SPB4YFL002C YGR126WP53274 230 aa4.03□□□□□ -1.76
SPB4YFL002C ERV25P54837 211 aaKnown RBP4.03□□□□□ -1.76
SPB4YFL002C DCS1Q06151 350 aa4.03□□□□□ -1.76
SPB4YFL002C NCE102Q12207 173 aaRIP-Chip data4.03□□□□□ -1.76not detected
SPB4YFL002C UBX3Q12229 455 aa4.03□□□□□ -1.76
SPB4YFL002C MDY2Q12285 212 aa4.03□□□□□ -1.76
SPB4YFL002C RHO2P06781 192 aa4.02□□□□□ -1.77
SPB4YFL002C COR1P07256 457 aa4.02□□□□□ -1.77
SPB4YFL002C PUT2P07275 575 aa4.02□□□□□ -1.77
SPB4YFL002C MAK32P23060 363 aa4.02□□□□□ -1.77
SPB4YFL002C CLB2P24869 491 aa4.02□□□□□ -1.77
SPB4YFL002C MCM4P30665 933 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C EMP70P32802 667 aa4.02□□□□□ -1.77
SPB4YFL002C MIA40P36046 403 aa4.02□□□□□ -1.77
SPB4YFL002C ZTA1P38230 334 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C PFF1P38244 976 aa4.02□□□□□ -1.77
SPB4YFL002C MMS4P38257 691 aa4.02□□□□□ -1.77
SPB4YFL002C RTT105P40063 208 aa4.02□□□□□ -1.77
SPB4YFL002C VHS2P40463 436 aa4.02□□□□□ -1.77
SPB4YFL002C KIN4Q01919 800 aa4.02□□□□□ -1.77
SPB4YFL002C GIS1Q03833 894 aa4.02□□□□□ -1.77
SPB4YFL002C YFH1Q07540 174 aa4.02□□□□□ -1.77
SPB4YFL002C NOP6Q07623 225 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C HBT1Q07653 1046 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C ACF2Q12168 779 aa4.02□□□□□ -1.77
SPB4YFL002C RRP36Q12481 300 aaPredicted RBP4.02□□□□□ -1.77
SPB4YFL002C MTR10Q99189 972 aa4.02□□□□□ -1.77
SPB4YFL002C SEC3P33332 1336 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C PEP4P07267 405 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C GEX1P25596 615 aa4.02□□□□□ -1.77
SPB4YFL002C DAL80P26343 269 aa4.02□□□□□ -1.77
SPB4YFL002C FAA1P30624 700 aaKnown RBP4.02□□□□□ -1.77
SPB4YFL002C SRB2P34162 210 aa4.02□□□□□ -1.77
SPB4YFL002C SHP1P34223 423 aa4.02□□□□□ -1.77
SPB4YFL002C ARP1P38696 384 aa4.02□□□□□ -1.77
SPB4YFL002C FAD1P38913 306 aa4.02□□□□□ -1.77
SPB4YFL002C ULP2P40537 1034 aaPredicted RBP4.02□□□□□ -1.77
SPB4YFL002C YTP1P53584 459 aa4.02□□□□□ -1.77
SPB4YFL002C AQR1P53943 586 aa4.02□□□□□ -1.77
SPB4YFL002C YDL057WQ07379 328 aa4.02□□□□□ -1.77
SPB4YFL002C YOR389WQ08912 624 aa4.02□□□□□ -1.77
SPB4YFL002C NBL1Q3E7Y6 73 aa4.02□□□□□ -1.77
SPB4YFL002C INO80P53115 1489 aa4.02□□□□□ -1.77
SPB4YFL002C RIP1P08067 215 aa4.01□□□□□ -1.77
SPB4YFL002C ARO3P14843 370 aaKnown RBP4.01□□□□□ -1.77
SPB4YFL002C TAL1P15019 335 aaKnown RBP4.01□□□□□ -1.77
SPB4YFL002C YCR006CP25350 157 aa4.01□□□□□ -1.77
SPB4YFL002C PXL1P36166 706 aa4.01□□□□□ -1.77
SPB4YFL002C PCH2P38126 564 aa4.01□□□□□ -1.77
SPB4YFL002C YDR089WP38966 869 aa4.01□□□□□ -1.77
SPB4YFL002C HEF3P53978 1044 aaKnown RBP4.01□□□□□ -1.77
SPB4YFL002C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SPB4YFL002C ATG26Q06321 1198 aa4.01□□□□□ -1.77
SPB4YFL002C DIS3Q08162 1001 aaKnown RBP4.01□□□□□ -1.77
SPB4YFL002C SUT2Q12286 268 aa4.01□□□□□ -1.77
SPB4YFL002C RAV1P47104 1357 aa4□□□□□ -1.77
SPB4YFL002C YER145C-AA0A023PYF4 145 aa4□□□□□ -1.77
SPB4YFL002C CAR1P00812 333 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C GPA1P08539 472 aa4□□□□□ -1.77
SPB4YFL002C HEM1P09950 548 aaPredicted RBP4□□□□□ -1.77
SPB4YFL002C CRM1P30822 1084 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C NIP1P32497 812 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C RPC34P32910 317 aa4□□□□□ -1.77
SPB4YFL002C RRP1P35178 278 aaPredicted RBP4□□□□□ -1.77
SPB4YFL002C ASC1P38011 319 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C YHR210CP38893 341 aa4□□□□□ -1.77
SPB4YFL002C ERV46P39727 415 aa4□□□□□ -1.77
SPB4YFL002C EFM3P47163 339 aa4□□□□□ -1.77
SPB4YFL002C LYS20P48570 428 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C PYK2P52489 506 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C YNL143CP53908 130 aa4□□□□□ -1.77
SPB4YFL002C ADE13Q05911 482 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C THP1Q08231 455 aa4□□□□□ -1.77
SPB4YFL002C RKM1Q08961 583 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms