RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C MRPS35P53292 345 aa6.44□□□□□ -1.38
SHO1YER118C YMR160WQ03823 816 aa6.44□□□□□ -1.38
SHO1YER118C ERV41Q04651 352 aa6.44□□□□□ -1.38
SHO1YER118C SSQ1Q05931 657 aaPredicted RBP6.44□□□□□ -1.38
SHO1YER118C ECM7Q06200 448 aa6.44□□□□□ -1.38
SHO1YER118C SLK19Q08581 821 aaKnown RBP6.44□□□□□ -1.38
SHO1YER118C YOR352WQ08816 343 aa6.44□□□□□ -1.38
SHO1YER118C LEA1Q08963 238 aaPredicted RBP6.44□□□□□ -1.38
SHO1YER118C VAM3Q12241 283 aa6.44□□□□□ -1.38
SHO1YER118C TRM11Q12463 433 aa6.44□□□□□ -1.38
SHO1YER118C LEU4P06208 619 aaKnown RBP6.43□□□□□ -1.38
SHO1YER118C GPA1P08539 472 aa6.43□□□□□ -1.38
SHO1YER118C SPS4P09937 338 aa6.43□□□□□ -1.38
SHO1YER118C RPL31BP0C2H9 113 aaKnown RBP6.43□□□□□ -1.38
SHO1YER118C GAL3P13045 520 aa6.43□□□□□ -1.38
SHO1YER118C SRP54P20424 541 aaKnown RBP6.43□□□□□ -1.38
SHO1YER118C YCL068CP25593 260 aa6.43□□□□□ -1.38
SHO1YER118C SUA5P32579 426 aa6.43□□□□□ -1.38
SHO1YER118C SIP3P38717 1229 aa6.43□□□□□ -1.38
SHO1YER118C PET100P38958 111 aa6.43□□□□□ -1.38
SHO1YER118C FUN12P39730 1002 aaKnown RBP6.43□□□□□ -1.38
SHO1YER118C SCC4P40090 624 aa6.43□□□□□ -1.38
SHO1YER118C MSY1P48527 492 aa6.43□□□□□ -1.38
SHO1YER118C YGL185CP53100 379 aa6.43□□□□□ -1.38
SHO1YER118C VPS73P53142 486 aaKnown RBP6.43□□□□□ -1.38
SHO1YER118C BUD9P53226 547 aa6.43□□□□□ -1.38
SHO1YER118C YGR127WP53275 312 aa6.43□□□□□ -1.38
SHO1YER118C RTT102P53330 157 aa6.43□□□□□ -1.38
SHO1YER118C HEF3P53978 1044 aaKnown RBP6.43□□□□□ -1.38
SHO1YER118C YLL007CQ07799 665 aa6.43□□□□□ -1.38
SHO1YER118C AHC1Q12433 566 aa6.43□□□□□ -1.38
SHO1YER118C SRN2Q99176 213 aa6.43□□□□□ -1.38
SHO1YER118C HXK2P04807 486 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C RNR2P09938 399 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C RPL5P26321 297 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C HSP104P31539 908 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C RME1P32338 300 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C ERG1P32476 496 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C HIR2P32480 875 aa6.42□□□□□ -1.38
SHO1YER118C MGM101P32787 269 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C FMO1P38866 432 aa6.42□□□□□ -1.38
SHO1YER118C MNL1P38888 796 aa6.42□□□□□ -1.38
SHO1YER118C END3P39013 349 aa6.42□□□□□ -1.38
SHO1YER118C RTR1P40084 226 aaPredicted RBP6.42□□□□□ -1.38
SHO1YER118C MSS2P40990 351 aa6.42□□□□□ -1.38
SHO1YER118C BAP3P41815 604 aa6.42□□□□□ -1.38
SHO1YER118C DPB11P47027 764 aaPredicted RBP6.42□□□□□ -1.38
SHO1YER118C YGL114WP53134 725 aa6.42□□□□□ -1.38
SHO1YER118C YNL134CP53912 376 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C OCA2P53949 197 aa6.42□□□□□ -1.38
SHO1YER118C EKI1Q03764 534 aa6.42□□□□□ -1.38
SHO1YER118C IZH3Q07959 543 aa6.42□□□□□ -1.38
SHO1YER118C DIS3Q08162 1001 aaKnown RBP6.42□□□□□ -1.38
SHO1YER118C CRT10Q08226 957 aa6.42□□□□□ -1.38
SHO1YER118C YOL107WQ12239 342 aa6.42□□□□□ -1.38
SHO1YER118C INP53Q12271 1107 aa6.42□□□□□ -1.38
SHO1YER118C JIP3O13555 125 aa6.41□□□□□ -1.38
SHO1YER118C YPR089WO13585 888 aa6.41□□□□□ -1.38
SHO1YER118C CYC1P00044 109 aaPredicted RBP6.41□□□□□ -1.38
SHO1YER118C COX1P00401 534 aa6.41□□□□□ -1.38
SHO1YER118C HIS5P07172 385 aa6.41□□□□□ -1.38
SHO1YER118C ELO2P25358 347 aa6.41□□□□□ -1.38
SHO1YER118C RAD14P28519 371 aa6.41□□□□□ -1.38
SHO1YER118C MVD1P32377 396 aaKnown RBP6.41□□□□□ -1.38
SHO1YER118C CDC5P32562 705 aa6.41□□□□□ -1.38
SHO1YER118C SNU114P36048 1008 aaKnown RBP6.41□□□□□ -1.38
SHO1YER118C YKR015CP36111 568 aa6.41□□□□□ -1.38
SHO1YER118C ASC1P38011 319 aaKnown RBP6.41□□□□□ -1.38
SHO1YER118C SWC5P38326 303 aa6.41□□□□□ -1.38
SHO1YER118C IMD2P38697 523 aaKnown RBP6.41□□□□□ -1.38
SHO1YER118C YHC3P47040 408 aa6.41□□□□□ -1.38
SHO1YER118C UBX6P47049 396 aa6.41□□□□□ -1.38
SHO1YER118C NPA3P47122 385 aa6.41□□□□□ -1.38
SHO1YER118C ASN2P49090 572 aaKnown RBP6.41□□□□□ -1.38
SHO1YER118C COQ6P53318 479 aa6.41□□□□□ -1.38
SHO1YER118C IST1P53843 298 aaPredicted RBP6.41□□□□□ -1.38
SHO1YER118C PGA2P53903 129 aa6.41□□□□□ -1.38
SHO1YER118C YDR541CQ03049 344 aa6.41□□□□□ -1.38
SHO1YER118C MRPS17Q03246 237 aaPredicted RBP6.41□□□□□ -1.38
SHO1YER118C WAR1Q03631 944 aa6.41□□□□□ -1.38
SHO1YER118C URC2Q04411 772 aa6.41□□□□□ -1.38
SHO1YER118C RRG8Q06109 277 aa6.41□□□□□ -1.38
SHO1YER118C RTT109Q07794 436 aa6.41□□□□□ -1.38
SHO1YER118C ATG9Q12142 997 aa6.41□□□□□ -1.38
SHO1YER118C GIS3Q12418 502 aa6.41□□□□□ -1.38
SHO1YER118C AI5_ALPHAQ9ZZX1 630 aa6.41□□□□□ -1.38
SHO1YER118C PUT2P07275 575 aa6.4□□□□□ -1.38
SHO1YER118C PMR1P13586 950 aa6.4□□□□□ -1.38
SHO1YER118C KGD2P19262 463 aaPredicted RBP6.4□□□□□ -1.38
SHO1YER118C SEC62P21825 274 aa6.4□□□□□ -1.38
SHO1YER118C CNE1P27825 502 aa6.4□□□□□ -1.38
SHO1YER118C PMI40P29952 429 aaKnown RBP6.4□□□□□ -1.38
SHO1YER118C RIM1P32445 135 aaKnown RBP6.4□□□□□ -1.38
SHO1YER118C BMH2P34730 273 aaKnown RBP6.4□□□□□ -1.38
SHO1YER118C HES1P35843 434 aa6.4□□□□□ -1.38
SHO1YER118C NUP133P36161 1157 aa6.4□□□□□ -1.38
SHO1YER118C SLX1P38324 304 aa6.4□□□□□ -1.38
SHO1YER118C TAE1P38340 232 aa6.4□□□□□ -1.38
SHO1YER118C ELO1P39540 310 aa6.4□□□□□ -1.38
SHO1YER118C RPN11P43588 306 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms