RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B BUB3P26449 341 aa13.72□□□□□ -0.21
YER088W-BYER088W-B YHL008CP38750 627 aa13.72□□□□□ -0.21
YER088W-BYER088W-B UTP9P38882 575 aaKnown RBP13.72□□□□□ -0.21
YER088W-BYER088W-B SEC27P41811 889 aaKnown RBP13.72□□□□□ -0.21
YER088W-BYER088W-B ALK1P43633 760 aaKnown RBP13.72□□□□□ -0.21
YER088W-BYER088W-B RIM21P48565 533 aa13.72□□□□□ -0.21
YER088W-BYER088W-B KXD1P53158 218 aa13.72□□□□□ -0.21
YER088W-BYER088W-B MRS2Q01926 470 aa13.72□□□□□ -0.21
YER088W-BYER088W-B YOL019WQ08157 551 aa13.72□□□□□ -0.21
YER088W-BYER088W-B NOP58Q12499 511 aaKnown RBP13.72□□□□□ -0.21
YER088W-BYER088W-B LAG2Q92325 660 aa13.72□□□□□ -0.21
YER088W-BYER088W-B BRR1Q99177 341 aaPredicted RBP13.72□□□□□ -0.21
YER088W-BYER088W-B PDC5P16467 563 aaKnown RBP13.71□□□□□ -0.21
YER088W-BYER088W-B TYR1P20049 452 aa13.71□□□□□ -0.21
YER088W-BYER088W-B HXT4P32467 576 aa13.71□□□□□ -0.21
YER088W-BYER088W-B CBF5P33322 483 aaKnown RBP RIP-Chip data13.71□□□□□ -0.21not detected
YER088W-BYER088W-B SQT1P35184 431 aa13.71□□□□□ -0.21
YER088W-BYER088W-B HXT6P39003 570 aaKnown RBP13.71□□□□□ -0.21
YER088W-BYER088W-B HXT7P39004 570 aa13.71□□□□□ -0.21
YER088W-BYER088W-B AZF1P41696 914 aa13.71□□□□□ -0.21
YER088W-BYER088W-B FHN1P53279 174 aa13.71□□□□□ -0.21
YER088W-BYER088W-B ESF2P53743 316 aaKnown RBP13.71□□□□□ -0.21
YER088W-BYER088W-B YML131WQ03102 365 aa13.71□□□□□ -0.21
YER088W-BYER088W-B GAS3Q03655 524 aa13.71□□□□□ -0.21
YER088W-BYER088W-B RRP45Q05636 305 aaKnown RBP13.71□□□□□ -0.21
YER088W-BYER088W-B YPL245WQ12179 454 aaKnown RBP13.71□□□□□ -0.21
YER088W-BYER088W-B YMR085WP0CF18 432 aa13.7□□□□□ -0.22
YER088W-BYER088W-B STE4P18851 423 aa13.7□□□□□ -0.22
YER088W-BYER088W-B AXL2P38928 823 aa13.7□□□□□ -0.22
YER088W-BYER088W-B SEC31P38968 1273 aaKnown RBP13.7□□□□□ -0.22
YER088W-BYER088W-B MET30P39014 640 aa13.7□□□□□ -0.22
YER088W-BYER088W-B SLM2P53955 656 aa13.7□□□□□ -0.22
YER088W-BYER088W-B GPB1Q08886 897 aa13.7□□□□□ -0.22
YER088W-BYER088W-B AI3P03877 415 aa13.69□□□□□ -0.22
YER088W-BYER088W-B RPS21AP0C0V8 87 aaKnown RBP13.69□□□□□ -0.22
YER088W-BYER088W-B PRP6P19735 899 aaPredicted RBP13.69□□□□□ -0.22
YER088W-BYER088W-B MSB1P21339 1137 aaKnown RBP13.69□□□□□ -0.22
YER088W-BYER088W-B NTH1P32356 751 aa13.69□□□□□ -0.22
YER088W-BYER088W-B RPS1AP33442 255 aaKnown RBP13.69□□□□□ -0.22
YER088W-BYER088W-B RMA1P36001 430 aaKnown RBP13.69□□□□□ -0.22
YER088W-BYER088W-B KKQ8P36004 724 aa13.69□□□□□ -0.22
YER088W-BYER088W-B EAP1P36041 632 aaKnown RBP13.69□□□□□ -0.22
YER088W-BYER088W-B YGL176CP46945 554 aa13.69□□□□□ -0.22
YER088W-BYER088W-B YJR154WP47181 346 aa13.69□□□□□ -0.22
YER088W-BYER088W-B GTR2P53290 341 aa13.69□□□□□ -0.22
YER088W-BYER088W-B TVP15Q03860 143 aa13.69□□□□□ -0.22
YER088W-BYER088W-B RRN11Q04712 507 aa13.69□□□□□ -0.22
YER088W-BYER088W-B YLR030WQ07967 263 aa13.69□□□□□ -0.22
YER088W-BYER088W-B RRN10P38204 145 aa13.68□□□□□ -0.22
YER088W-BYER088W-B YPT32P51996 222 aaKnown RBP13.68□□□□□ -0.22
YER088W-BYER088W-B YNR021WP53723 404 aaKnown RBP13.68□□□□□ -0.22
YER088W-BYER088W-B YPL109CQ02981 657 aa13.68□□□□□ -0.22
YER088W-BYER088W-B ROY1Q04847 553 aa13.68□□□□□ -0.22
YER088W-BYER088W-B YLR049CQ12110 428 aa13.68□□□□□ -0.22
YER088W-BYER088W-B TY4A-HQ6Q5P6 413 aa13.68□□□□□ -0.22
YER088W-BYER088W-B YCR006CP25350 157 aa13.67□□□□□ -0.22
YER088W-BYER088W-B AGP1P25376 633 aa13.67□□□□□ -0.22
YER088W-BYER088W-B SFA1P32771 386 aa13.67□□□□□ -0.22
YER088W-BYER088W-B FKH2P41813 862 aa13.67□□□□□ -0.22
YER088W-BYER088W-B GCD10P41814 478 aa13.67□□□□□ -0.22
YER088W-BYER088W-B SIZ1Q04195 904 aa13.67□□□□□ -0.22
YER088W-BYER088W-B OMS1Q06668 471 aa13.67□□□□□ -0.22
YER088W-BYER088W-B MHT1Q12525 324 aa13.67□□□□□ -0.22
YER088W-BYER088W-B SEC39Q12745 709 aa13.67□□□□□ -0.22
YER088W-BYER088W-B NUM1Q00402 2748 aa13.67□□□□□ -0.22
YER088W-BYER088W-B COX13P32799 129 aa13.66□□□□□ -0.22
YER088W-BYER088W-B EHT1P38295 451 aa13.66□□□□□ -0.22
YER088W-BYER088W-B BEM4P39011 633 aa13.66□□□□□ -0.22
YER088W-BYER088W-B CAB2P40506 365 aa13.66□□□□□ -0.22
YER088W-BYER088W-B MNT3P40549 630 aa13.66□□□□□ -0.22
YER088W-BYER088W-B YPR022CQ12139 1133 aa13.66□□□□□ -0.22
YER088W-BYER088W-B LEU9Q12166 604 aaKnown RBP13.66□□□□□ -0.22
YER088W-BYER088W-B CUP1-1P0CX80 61 aa13.65□□□□□ -0.22
YER088W-BYER088W-B CUP1-2P0CX81 61 aa13.65□□□□□ -0.22
YER088W-BYER088W-B PRO1P32264 428 aa13.65□□□□□ -0.22
YER088W-BYER088W-B BMT2P38278 337 aa13.65□□□□□ -0.22
YER088W-BYER088W-B SHU2P38957 223 aa13.65□□□□□ -0.22
YER088W-BYER088W-B YER158CP40095 573 aa13.65□□□□□ -0.22
YER088W-BYER088W-B VRG4P40107 337 aa13.65□□□□□ -0.22
YER088W-BYER088W-B SPG5P42933 373 aa13.65□□□□□ -0.22
YER088W-BYER088W-B GUP2Q08929 609 aa13.65□□□□□ -0.22
YER088W-BYER088W-B COS2P0CX12 379 aa13.64□□□□□ -0.23
YER088W-BYER088W-B COS3P0CX13 379 aa13.64□□□□□ -0.23
YER088W-BYER088W-B PRP2P20095 876 aaPredicted RBP13.64□□□□□ -0.23
YER088W-BYER088W-B TRX3P25372 127 aa13.64□□□□□ -0.23
YER088W-BYER088W-B IMG1P25626 169 aa13.64□□□□□ -0.23
YER088W-BYER088W-B ADE1P27616 306 aa13.64□□□□□ -0.23
YER088W-BYER088W-B PDR3P33200 976 aa13.64□□□□□ -0.23
YER088W-BYER088W-B SCS2P40075 244 aaKnown RBP13.64□□□□□ -0.23
YER088W-BYER088W-B APQ12P40532 138 aa13.64□□□□□ -0.23
YER088W-BYER088W-B TDA10P42938 290 aa13.64□□□□□ -0.23
YER088W-BYER088W-B COS4P43542 379 aa13.64□□□□□ -0.23
YER088W-BYER088W-B TAF6P53040 516 aa13.64□□□□□ -0.23
YER088W-BYER088W-B YOL073CQ08232 322 aa13.64□□□□□ -0.23
YER088W-BYER088W-B IRC13Q08630 104 aa13.64□□□□□ -0.23
YER088W-BYER088W-B PNO1Q99216 274 aaKnown RBP13.64□□□□□ -0.23
YER088W-BYER088W-B RIP1P08067 215 aa13.63□□□□□ -0.23
YER088W-BYER088W-B SGV1P23293 657 aaKnown RBP13.63□□□□□ -0.23
YER088W-BYER088W-B GBP2P25555 427 aaKnown RBP RIP-Chip data13.63□□□□□ -0.23not detected
YER088W-BYER088W-B TAF14P35189 244 aa13.63□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms