RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YGL108C	P53139	140 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	YNL144C	P53907	740 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	SLG1	P54867	378 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	YMR178W	Q03219	274 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	PPM1	Q04081	328 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	YMR130W	Q04223	302 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	SPH1	Q06160	661 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	YOR389W	Q08912	624 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	ARG81	P05085	880 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	RPC40	P07703	335 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	PRP2	P20095	876 aa	Predicted RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	CLN1	P20437	546 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	GEX1	P25596	615 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	YMC1	P32331	307 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	SAC1	P32368	623 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	WSS1	P38838	269 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	MLH1	P38920	769 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	CUE3	P53137	624 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	DRN1	P53255	507 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	AEP3	Q12089	606 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	CBP1	P07252	654 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	PEP4	P07267	405 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	AQY1	P0CD91	305 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	NUP1	P20676	1076 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	CLB2	P24869	491 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	CRM1	P30822	1084 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	HIR2	P32480	875 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	SUR1	P33300	382 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	ASC1	P38011	319 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	ARA1	P38115	344 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	ZTA1	P38230	334 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	RIX1	P38883	763 aa	Predicted RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	CHS6	P40955	746 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	URB2	P47108	1174 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	PYK2	P52489	506 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	PDR16	P53860	351 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	OCA2	P53949	197 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	ADA2	Q02336	434 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	DIS3	Q08162	1001 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	SLK19	Q08581	821 aa	Known RBP	2.79	□□□□□ -1.96
TFB1	YDR311W	YLR049C	Q12110	428 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	ACF2	Q12168	779 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	UBX3	Q12229	455 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	VAM3	Q12241	283 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	SUT2	Q12286	268 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	RRD2	Q12461	358 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	INO80	P53115	1489 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	YLR278C	Q05854	1341 aa		2.79	□□□□□ -1.96
TFB1	YDR311W	RPL6B	P05739	176 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	PUT2	P07275	575 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	SPS4	P09937	338 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	SUI2	P20459	304 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	KIN3	P22209	435 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	RAD14	P28519	371 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	PPQ1	P32945	549 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	OAR1	P35731	278 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	PCH2	P38126	564 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	TCM62	P38228	572 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	SDS3	P40505	327 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	CIN1	P40987	1014 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	LYS20	P48570	428 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	YGR126W	P53274	230 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	HEF3	P53978	1044 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	ASI1	P54074	624 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	RPL6A	Q02326	176 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	ATG26	Q06321	1198 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	NOP6	Q07623	225 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	CDC45	Q08032	650 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	ETT1	Q08421	412 aa	Known RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	MDY2	Q12285	212 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	YDR061W	Q12298	539 aa		2.78	□□□□□ -1.96
TFB1	YDR311W	RRP36	Q12481	300 aa	Predicted RBP	2.78	□□□□□ -1.96
TFB1	YDR311W	YMR084W	A2P2R3	262 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	SNF3	P10870	884 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	SGV1	P23293	657 aa	Known RBP	2.78	□□□□□ -1.97
TFB1	YDR311W	MIA40	P36046	403 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	MOH1	P38191	138 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	YTA12	P40341	825 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	VHS2	P40463	436 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	YIL089W	P40500	205 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	YIL060W	P40519	144 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	ULP2	P40537	1034 aa	Predicted RBP	2.78	□□□□□ -1.97
TFB1	YDR311W	EPL1	P43572	832 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	YJL043W	P47053	257 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	YNL058C	P53947	316 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	ABZ2	Q03266	374 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	MDM30	Q05930	598 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	DCS1	Q06151	350 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	HBT1	Q07653	1046 aa	Known RBP	2.78	□□□□□ -1.97
TFB1	YDR311W	THP1	Q08231	455 aa		2.78	□□□□□ -1.97
TFB1	YDR311W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.78	□□□□□ -1.97
TFB1	YDR311W	RAV1	P47104	1357 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	RAD52	P06778	471 aa	Known RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	RIP1	P08067	215 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	HEM1	P09950	548 aa	Predicted RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	SRV2	P17555	526 aa	Known RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	CNA1	P23287	553 aa		2.77	□□□□□ -1.97
TFB1	YDR311W	SAT4	P25333	603 aa	Known RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	FAA1	P30624	700 aa	Known RBP	2.77	□□□□□ -1.97
TFB1	YDR311W	MRPL4	P36517	319 aa		2.77	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms