RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W SUL2Q12325 893 aa1.7□□□□□ -2.14
TRM3YDL112W ACC1Q00955 2233 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W RAD3P06839 778 aa1.69□□□□□ -2.14
TRM3YDL112W MET16P18408 261 aaPredicted RBP1.69□□□□□ -2.14
TRM3YDL112W SPC110P32380 944 aa1.69□□□□□ -2.14
TRM3YDL112W RAD5P32849 1169 aaPredicted RBP1.69□□□□□ -2.14
TRM3YDL112W DBP8P38719 431 aa1.69□□□□□ -2.14
TRM3YDL112W YEL075CP39972 122 aa1.69□□□□□ -2.14
TRM3YDL112W ARG2P40360 574 aa1.69□□□□□ -2.14
TRM3YDL112W SER33P40510 469 aa1.69□□□□□ -2.14
TRM3YDL112W IDS2P46958 469 aa1.69□□□□□ -2.14
TRM3YDL112W YGR021WP53212 290 aa1.69□□□□□ -2.14
TRM3YDL112W MOT3P54785 490 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W ARG5,6Q01217 863 aa1.69□□□□□ -2.14
TRM3YDL112W NGL3Q03210 505 aa1.69□□□□□ -2.14
TRM3YDL112W BLS1Q06071 122 aa1.69□□□□□ -2.14
TRM3YDL112W YLR030WQ07967 263 aa1.69□□□□□ -2.14
TRM3YDL112W YOL075CQ08234 1294 aa1.69□□□□□ -2.14
TRM3YDL112W MLH3Q12083 715 aa1.69□□□□□ -2.14
TRM3YDL112W SCH9P11792 824 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W SEC62P21825 274 aa1.69□□□□□ -2.14
TRM3YDL112W UBA1P22515 1024 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W ADY2P25613 283 aa1.69□□□□□ -2.14
TRM3YDL112W RFA2P26754 273 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W HXT1P32465 570 aa1.69□□□□□ -2.14
TRM3YDL112W SAC6P32599 642 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W CTF13P35203 478 aa1.69□□□□□ -2.14
TRM3YDL112W ALY1P36117 915 aa1.69□□□□□ -2.14
TRM3YDL112W HXT6P39003 570 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W HXT7P39004 570 aa1.69□□□□□ -2.14
TRM3YDL112W VFA1P40080 203 aa1.69□□□□□ -2.14
TRM3YDL112W RPT2P40327 437 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W SAP185P40856 1058 aa1.69□□□□□ -2.14
TRM3YDL112W ASG7P46993 209 aa1.69□□□□□ -2.14
TRM3YDL112W AMA1P50082 593 aa1.69□□□□□ -2.14
TRM3YDL112W SWC4P53201 476 aa1.69□□□□□ -2.14
TRM3YDL112W TRM112P53738 135 aaPredicted RBP1.69□□□□□ -2.14
TRM3YDL112W YNL144CP53907 740 aa1.69□□□□□ -2.14
TRM3YDL112W VAC7P53950 1165 aa1.69□□□□□ -2.14
TRM3YDL112W ACS1Q01574 713 aa1.69□□□□□ -2.14
TRM3YDL112W YMR178WQ03219 274 aaKnown RBP1.69□□□□□ -2.14
TRM3YDL112W ARA2Q04212 335 aa1.69□□□□□ -2.14
TRM3YDL112W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
TRM3YDL112W YOR378WQ08902 515 aa1.69□□□□□ -2.14
TRM3YDL112W POM34Q12445 299 aa1.69□□□□□ -2.14
TRM3YDL112W PHO81P17442 1178 aa1.69□□□□□ -2.14
TRM3YDL112W YSR3P23501 404 aa1.69□□□□□ -2.14
TRM3YDL112W TFC3P34111 1160 aa1.69□□□□□ -2.14
TRM3YDL112W AXL2P38928 823 aa1.69□□□□□ -2.14
TRM3YDL112W YER189WP40104 122 aa1.69□□□□□ -2.14
TRM3YDL112W YIL054WP40524 105 aa1.69□□□□□ -2.14
TRM3YDL112W UBX6P47049 396 aa1.69□□□□□ -2.14
TRM3YDL112W PET130P47065 347 aa1.69□□□□□ -2.14
TRM3YDL112W MAD3P47074 515 aa1.69□□□□□ -2.14
TRM3YDL112W BIR1P47134 954 aa1.69□□□□□ -2.14
TRM3YDL112W YPR003CP53394 754 aa1.69□□□□□ -2.14
TRM3YDL112W THI7Q05998 598 aa1.69□□□□□ -2.14
TRM3YDL112W POL2P21951 2222 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W HOM3P10869 527 aa1.68□□□□□ -2.14
TRM3YDL112W PHO13P19881 312 aa1.68□□□□□ -2.14
TRM3YDL112W SPS19P32573 292 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W YSW1P38280 609 aa1.68□□□□□ -2.14
TRM3YDL112W SMC2P38989 1170 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W YJL206CP39529 758 aa1.68□□□□□ -2.14
TRM3YDL112W SPC72P39723 622 aa1.68□□□□□ -2.14
TRM3YDL112W GPP2P40106 250 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W MEP1P40260 492 aa1.68□□□□□ -2.14
TRM3YDL112W NDC80P40460 691 aa1.68□□□□□ -2.14
TRM3YDL112W SSU1P41930 458 aa1.68□□□□□ -2.14
TRM3YDL112W YJL107CP42947 387 aa1.68□□□□□ -2.14
TRM3YDL112W ZRG17P53735 605 aa1.68□□□□□ -2.14
TRM3YDL112W CIA1Q05583 330 aa1.68□□□□□ -2.14
TRM3YDL112W MCP2Q06567 569 aa1.68□□□□□ -2.14
TRM3YDL112W YOL114CQ12322 202 aa1.68□□□□□ -2.14
TRM3YDL112W GPR1Q12361 961 aa1.68□□□□□ -2.14
TRM3YDL112W CDC37P06101 506 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W LAT1P12695 482 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W HEM12P32347 362 aaPredicted RBP1.68□□□□□ -2.14
TRM3YDL112W SIP1P32578 815 aa1.68□□□□□ -2.14
TRM3YDL112W YET1P35723 206 aa1.68□□□□□ -2.14
TRM3YDL112W SET3P36124 751 aa1.68□□□□□ -2.14
TRM3YDL112W TIM17P39515 158 aa1.68□□□□□ -2.14
TRM3YDL112W YEL028WP39989 153 aa1.68□□□□□ -2.14
TRM3YDL112W BUD8P41698 603 aa1.68□□□□□ -2.14
TRM3YDL112W CHA4P43634 648 aa1.68□□□□□ -2.14
TRM3YDL112W COG1P53079 417 aa1.68□□□□□ -2.14
TRM3YDL112W SGF73P53165 657 aa1.68□□□□□ -2.14
TRM3YDL112W COG7P53195 279 aa1.68□□□□□ -2.14
TRM3YDL112W SUR7P54003 302 aa1.68□□□□□ -2.14
TRM3YDL112W RPL22BP56628 122 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W DIC1Q06143 298 aa1.68□□□□□ -2.14
TRM3YDL112W LDB18Q07887 179 aa1.68□□□□□ -2.14
TRM3YDL112W AFT2Q08957 416 aa1.68□□□□□ -2.14
TRM3YDL112W DAS2Q12084 232 aa1.68□□□□□ -2.14
TRM3YDL112W MRH1Q12117 320 aaPredicted RBP1.68□□□□□ -2.14
TRM3YDL112W RRP6Q12149 733 aaKnown RBP1.68□□□□□ -2.14
TRM3YDL112W YOR012WQ12351 137 aa1.68□□□□□ -2.14
TRM3YDL112W RKM5Q12367 367 aa1.68□□□□□ -2.14
TRM3YDL112W HSH49Q99181 213 aaPredicted RBP1.68□□□□□ -2.14
TRM3YDL112W PMS1P14242 873 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms