RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C URA3P03962 267 aa1.07□□□□□ -2.24
VAM6YDL077C GAL1P04385 528 aa1.07□□□□□ -2.24
VAM6YDL077C HXK1P04806 485 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C KIN28P06242 306 aa1.07□□□□□ -2.24
VAM6YDL077C GPA2P10823 449 aa1.07□□□□□ -2.24
VAM6YDL077C HOM3P10869 527 aa1.07□□□□□ -2.24
VAM6YDL077C MRP7P12687 371 aa1.07□□□□□ -2.24
VAM6YDL077C CAP2P13517 287 aa1.07□□□□□ -2.24
VAM6YDL077C PFK2P16862 959 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
VAM6YDL077C PRP6P19735 899 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C RPI1P23250 407 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C MNE1P24720 663 aa1.07□□□□□ -2.24
VAM6YDL077C LCB1P25045 558 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C RNA14P25298 677 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C GIT1P25346 518 aa1.07□□□□□ -2.24
VAM6YDL077C RNQ1P25367 405 aa1.07□□□□□ -2.24
VAM6YDL077C MGR1P25573 417 aa1.07□□□□□ -2.24
VAM6YDL077C EMC1P25574 760 aa1.07□□□□□ -2.24
VAM6YDL077C RPS7AP26786 190 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C CMK1P27466 446 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C HRR25P29295 494 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C TPS2P31688 896 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C ACH1P32316 526 aa1.07□□□□□ -2.24
VAM6YDL077C RTG2P32608 588 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C GSP1P32835 219 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C GSP2P32836 220 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C BEM3P32873 1128 aa1.07□□□□□ -2.24
VAM6YDL077C SUI1P32911 108 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C SRP101P32916 621 aa1.07□□□□□ -2.24
VAM6YDL077C TYE7P33122 291 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C RIB5P38145 238 aa1.07□□□□□ -2.24
VAM6YDL077C FIG1P38224 298 aa1.07□□□□□ -2.24
VAM6YDL077C PRS2P38620 318 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C RCK1P38622 512 aa1.07□□□□□ -2.24
VAM6YDL077C RIM4P38741 713 aa1.07□□□□□ -2.24
VAM6YDL077C YHI9P38765 294 aa1.07□□□□□ -2.24
VAM6YDL077C YAP1801P38856 637 aa1.07□□□□□ -2.24
VAM6YDL077C IKI1P38874 309 aa1.07□□□□□ -2.24
VAM6YDL077C MNN1P39106 762 aa1.07□□□□□ -2.24
VAM6YDL077C SAW1P39735 261 aa1.07□□□□□ -2.24
VAM6YDL077C NPR2P39923 615 aa1.07□□□□□ -2.24
VAM6YDL077C STL1P39932 569 aa1.07□□□□□ -2.24
VAM6YDL077C KRE29P40026 464 aa1.07□□□□□ -2.24
VAM6YDL077C TPA1P40032 644 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C RGI1P40043 161 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C YTA12P40341 825 aa1.07□□□□□ -2.24
VAM6YDL077C NIT1P40447 199 aa1.07□□□□□ -2.24
VAM6YDL077C CSM2P40465 213 aa1.07□□□□□ -2.24
VAM6YDL077C DPH1P40487 425 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C SEC28P40509 296 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C NEO1P40527 1151 aa1.07□□□□□ -2.24
VAM6YDL077C FAF1P40546 346 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C ARF3P40994 183 aaRIP-Chip data1.07□□□□□ -2.24 RIP-Chip
VAM6YDL077C YGR210CP42942 411 aa1.07□□□□□ -2.24
VAM6YDL077C CNN1P43618 361 aa1.07□□□□□ -2.24
VAM6YDL077C MNN5P46982 586 aa1.07□□□□□ -2.24
VAM6YDL077C DPB11P47027 764 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C BIT61P47041 543 aa1.07□□□□□ -2.24
VAM6YDL077C HOC1P47124 396 aa1.07□□□□□ -2.24
VAM6YDL077C BPL1P48445 690 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C ORC5P50874 479 aa1.07□□□□□ -2.24
VAM6YDL077C PMT5P52867 743 aa1.07□□□□□ -2.24
VAM6YDL077C NBP35P52920 328 aa1.07□□□□□ -2.24
VAM6YDL077C COS12P53053 380 aa1.07□□□□□ -2.24
VAM6YDL077C DOC1P53068 250 aa1.07□□□□□ -2.24
VAM6YDL077C CUL3P53202 744 aa1.07□□□□□ -2.24
VAM6YDL077C POP6P53218 158 aa1.07□□□□□ -2.24
VAM6YDL077C PEX8P53248 589 aa1.07□□□□□ -2.24
VAM6YDL077C YNR062CP53748 327 aa1.07□□□□□ -2.24
VAM6YDL077C ARP4P80428 489 aa1.07□□□□□ -2.24
VAM6YDL077C RHO3Q00245 231 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C ARL3Q02804 198 aa1.07□□□□□ -2.24
VAM6YDL077C SEN54Q02825 467 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C EAR1Q03212 550 aa1.07□□□□□ -2.24
VAM6YDL077C MMT1Q03218 510 aa1.07□□□□□ -2.24
VAM6YDL077C YMR279CQ03263 540 aa1.07□□□□□ -2.24
VAM6YDL077C HER2Q03557 464 aa1.07□□□□□ -2.24
VAM6YDL077C ATC1Q04005 294 aa1.07□□□□□ -2.24
VAM6YDL077C UFO1Q04511 668 aa1.07□□□□□ -2.24
VAM6YDL077C ARP10Q04549 284 aa1.07□□□□□ -2.24
VAM6YDL077C SMA2Q04658 369 aa1.07□□□□□ -2.24
VAM6YDL077C YMR253CQ04835 414 aa1.07□□□□□ -2.24
VAM6YDL077C CIA1Q05583 330 aa1.07□□□□□ -2.24
VAM6YDL077C GLO2Q05584 274 aa1.07□□□□□ -2.24
VAM6YDL077C GMC2Q06201 188 aa1.07□□□□□ -2.24
VAM6YDL077C CUR1Q06469 252 aa1.07□□□□□ -2.24
VAM6YDL077C SNA4Q07549 140 aa1.07□□□□□ -2.24
VAM6YDL077C NGL1Q08213 363 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C PIN2Q12057 282 aa1.07□□□□□ -2.24
VAM6YDL077C LYS21Q12122 440 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C NSL1Q12143 216 aa1.07□□□□□ -2.24
VAM6YDL077C REC8Q12188 680 aa1.07□□□□□ -2.24
VAM6YDL077C YOR114WQ12219 294 aa1.07□□□□□ -2.24
VAM6YDL077C PKH2Q12236 1081 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C YLR046CQ12253 270 aa1.07□□□□□ -2.24
VAM6YDL077C NYV1Q12255 253 aa1.07□□□□□ -2.24
VAM6YDL077C RPN6Q12377 434 aa1.07□□□□□ -2.24
VAM6YDL077C SFG1Q12507 346 aa1.07□□□□□ -2.24
VAM6YDL077C DCP1Q12517 231 aaPredicted RBP1.07□□□□□ -2.24
VAM6YDL077C RIB3Q99258 208 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms