RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	DIA1	P54005	336 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	RAD30	Q04049	632 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	CRF1	Q04930	467 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	DCR2	Q05924	578 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	ESA1	Q08649	445 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	GPN2	Q08726	347 aa	Predicted RBP	4.11	□□□□□ -1.75
HCM1	YCR065W	CTI6	Q08923	506 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	DDC1	Q08949	612 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	GET3	Q12154	354 aa	Known RBP	4.11	□□□□□ -1.75
HCM1	YCR065W	UBX3	Q12229	455 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	APM4	Q99186	491 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	ISN1	Q99312	450 aa		4.11	□□□□□ -1.75
HCM1	YCR065W	HIS4	P00815	799 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	RPS21A	P0C0V8	87 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	CBS1	P14066	229 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	RNR1	P21524	888 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	RVS161	P25343	265 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YCR051W	P25631	222 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	ATP7	P30902	174 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	YKL070W	P36087	169 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	TDA3	P38758	523 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	RTT107	P38850	1070 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SMF1	P38925	575 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	UME6	P39001	836 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	HXT6	P39003	570 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	HXT7	P39004	570 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	EMC2	P47133	292 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	COP1	P53622	1201 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YNL181W	P53878	407 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	URH1	Q04179	340 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	DYN3	Q04949	312 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SKG3	Q06315	1026 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	GSH2	Q08220	491 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	BUD7	Q08754	746 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	NUR1	Q12066	484 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	PSF3	Q12146	194 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	GAL4	P04386	881 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	RPL6B	P05739	176 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	HIS3	P06633	220 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SUI3	P09064	285 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	RPL35A	P0CX84	120 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	RPL35B	P0CX85	120 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	ALG1	P16661	449 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SRV2	P17555	526 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	CYM1	P32898	989 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SUL1	P38359	859 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	YAP3	P38749	330 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	YHR045W	P38775	560 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	FHL1	P39521	936 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SOP4	P39543	234 aa	Predicted RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	SSO2	P39926	295 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	YER184C	P39961	794 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	PSF2	P40359	213 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	CAB2	P40506	365 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	ERG10	P41338	398 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YFR018C	P43599	363 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	EFM3	P47163	339 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	BIO3	P50277	480 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	PNC1	P53184	216 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YGR127W	P53275	312 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	AQR1	P53943	586 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SLT2	Q00772	484 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	RPL6A	Q02326	176 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YMR210W	Q03649	449 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	DLT1	Q04216	342 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	RGC1	Q06108	1083 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YLL007C	Q07799	665 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	SDO1	Q07953	250 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YOL073C	Q08232	322 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	REX4	Q08237	289 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	FRE5	Q08908	694 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	NMD4	Q12129	218 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	YOL107W	Q12239	342 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	CTF3	Q12748	733 aa		4.1	□□□□□ -1.75
HCM1	YCR065W	RRP12	Q12754	1228 aa	Known RBP	4.1	□□□□□ -1.75
HCM1	YCR065W	YPR089W	O13585	888 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	CDC24	P11433	854 aa	Predicted RBP	4.09	□□□□□ -1.76
HCM1	YCR065W	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.76
HCM1	YCR065W	STE12	P13574	688 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	CDC23	P16522	626 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	SIR1	P21691	654 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	ERG6	P25087	383 aa	Known RBP	4.09	□□□□□ -1.76
HCM1	YCR065W	ERV1	P27882	189 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	CAP1	P28495	268 aa	Known RBP	4.09	□□□□□ -1.76
HCM1	YCR065W	YME1	P32795	747 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	GDT1	P38301	280 aa	Predicted RBP	4.09	□□□□□ -1.76
HCM1	YCR065W	YBR259W	P38338	688 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	CHS7	P38843	316 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	YHR202W	P38887	602 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	RCY1	P39531	840 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	JLP2	P40206	208 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	VMA13	P41807	478 aa	Known RBP	4.09	□□□□□ -1.76
HCM1	YCR065W	IBA57	P47158	497 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	TWF1	P53250	332 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	RRN9	P53437	365 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	VAC7	P53950	1165 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	ORC4	P54791	529 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	ARG5,6	Q01217	863 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	KRE28	Q04431	385 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms