RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB6, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB6	YBR253W	LAC1	P28496	418 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	AFG1	P32317	509 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	SPC110	P32380	944 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	ELM1	P32801	640 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	VPS17	P32913	551 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	SRB2	P34162	210 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	RPF2	P36160	344 aa	Known RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	YHR131C	P38835	850 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	ECM10	P39987	644 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	YTA12	P40341	825 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	YIL089W	P40500	205 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	SPT20	P50875	604 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	YGL138C	P53122	345 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	VPS73	P53142	486 aa	Known RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	NMA2	P53204	395 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	CAF130	P53280	1122 aa	Predicted RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	YGR151C	P53287	111 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	YNL144C	P53907	740 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	TRS23	Q03784	219 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	RBA50	Q04418	439 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	UFO1	Q04511	668 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	ENB1	Q08299	606 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	SGT2	Q12118	346 aa	Known RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	INP53	Q12271	1107 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	TRM13	Q12383	476 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.77	□□□□□ -1.65
SRB6	YBR253W	Q0010	Q9ZZX9	128 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	DNF3	Q12674	1656 aa		4.77	□□□□□ -1.65
SRB6	YBR253W	TRP4	P07285	380 aa	Predicted RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	ILV2	P07342	687 aa	Known RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	FRS2	P15625	503 aa	Known RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	ART10	P18634	518 aa	Known RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	CLN1	P20437	546 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	PHO91	P27514	894 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YIM1	P28625	365 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	GSH1	P32477	678 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	GDA1	P32621	518 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	MRPL10	P36520	322 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	PIM1	P36775	1133 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YPT10	P38146	199 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YDR089W	P38966	869 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	UIP3	P39547	235 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YFR020W	P43600	232 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	ALK1	P43633	760 aa	Known RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	FAR3	P46671	204 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YJL163C	P46996	555 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YJL132W	P47014	750 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	DPB11	P47027	764 aa	Predicted RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	MRPL22	P53881	309 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	AQR1	P53943	586 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	SKO1	Q02100	647 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	TOF2	Q02208	771 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	RNH1	Q04740	348 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	RRP45	Q05636	305 aa	Known RBP	4.76	□□□□□ -1.65
SRB6	YBR253W	YOL159C	Q08300	171 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	LCB4	Q12246	624 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YDR061W	Q12298	539 aa		4.76	□□□□□ -1.65
SRB6	YBR253W	YLR278C	Q05854	1341 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	CHO2	P05374	869 aa	Known RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	ABF1	P14164	731 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	BUD5	P25300	642 aa	Predicted RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	CRM1	P30822	1084 aa	Known RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	SOF1	P33750	489 aa	Known RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	LHS1	P36016	881 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	SNU114	P36048	1008 aa	Known RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	YKR073C	P36153	106 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	MRPL40	P36534	297 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	NTC20	P38302	140 aa	Predicted RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	FAD1	P38913	306 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	MLH1	P38920	769 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	VPS45	P38932	577 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	FMP52	P40008	231 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	MKT1	P40850	830 aa	Known RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	EPL1	P43572	832 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	ECM27	P47144	725 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	IST1	P53843	298 aa	Predicted RBP	4.75	□□□□□ -1.65
SRB6	YBR253W	VTC3	Q02725	835 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	ABZ2	Q03266	374 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	CRT10	Q08226	957 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	YPR053C	Q6Q5F3	151 aa		4.75	□□□□□ -1.65
SRB6	YBR253W	SPO7	P18410	259 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	STE4	P18851	423 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	ELO2	P25358	347 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	YBL055C	P34220	418 aa	Predicted RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	PRX1	P34227	261 aa	Known RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	NUP133	P36161	1157 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	PFF1	P38244	976 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	GDT1	P38301	280 aa	Predicted RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	KSP1	P38691	1029 aa	Known RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	IMD2	P38697	523 aa	Known RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	MSR1	P38714	643 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	TCD1	P38756	429 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	CIN4	P39110	191 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	ELO1	P39540	310 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	SEC27	P41811	889 aa	Known RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	URB2	P47108	1174 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	COS5	P47187	383 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	BUL1	P48524	976 aa		4.74	□□□□□ -1.65
SRB6	YBR253W	MCM6	P53091	1017 aa	Known RBP	4.74	□□□□□ -1.65
SRB6	YBR253W	YNL143C	P53908	130 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms