RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C SEC24P40482 926 aaKnown RBP1.34□□□□□ -2.19
YAR009CYAR009C PKP1P40530 394 aa1.34□□□□□ -2.19
YAR009CYAR009C SMC3P47037 1230 aa1.34□□□□□ -2.19
YAR009CYAR009C LSC1P53598 329 aaKnown RBP1.34□□□□□ -2.19
YAR009CYAR009C IZH1Q03419 316 aa1.34□□□□□ -2.19
YAR009CYAR009C ARP10Q04549 284 aa1.34□□□□□ -2.19
YAR009CYAR009C UTP21Q06078 939 aaPredicted RBP1.34□□□□□ -2.19
YAR009CYAR009C MCP2Q06567 569 aa1.34□□□□□ -2.19
YAR009CYAR009C OPY2Q06810 360 aa1.34□□□□□ -2.19
YAR009CYAR009C CIR2Q08822 631 aa1.34□□□□□ -2.19
YAR009CYAR009C SKM1Q12469 655 aa1.34□□□□□ -2.19
YAR009CYAR009C PRP8P33334 2413 aaKnown RBP1.34□□□□□ -2.19
YAR009CYAR009C RPB8P20436 146 aa1.34□□□□□ -2.19
YAR009CYAR009C RTS1P38903 757 aa1.34□□□□□ -2.19
YAR009CYAR009C BUR6P40096 142 aa1.34□□□□□ -2.19
YAR009CYAR009C BSC5P53755 489 aa1.34□□□□□ -2.19
YAR009CYAR009C ADA2Q02336 434 aa1.34□□□□□ -2.19
YAR009CYAR009C MLH2Q07980 695 aa1.34□□□□□ -2.19
YAR009CYAR009C SRL1Q08673 210 aa1.34□□□□□ -2.19
YAR009CYAR009C APL4Q12028 832 aa1.34□□□□□ -2.19
YAR009CYAR009C APE1P14904 514 aa1.34□□□□□ -2.2
YAR009CYAR009C CLB2P24869 491 aa1.34□□□□□ -2.2
YAR009CYAR009C YPT35P38815 214 aaKnown RBP1.34□□□□□ -2.2
YAR009CYAR009C PCL6P40038 420 aa1.34□□□□□ -2.2
YAR009CYAR009C AAD10P47182 288 aa1.34□□□□□ -2.2
YAR009CYAR009C SGF73P53165 657 aa1.34□□□□□ -2.2
YAR009CYAR009C PIL1P53252 339 aaKnown RBP1.34□□□□□ -2.2
YAR009CYAR009C YTP1P53584 459 aa1.34□□□□□ -2.2
YAR009CYAR009C YMR178WQ03219 274 aaKnown RBP1.34□□□□□ -2.2
YAR009CYAR009C CTL1Q03220 320 aaKnown RBP1.34□□□□□ -2.2
YAR009CYAR009C YMR034CQ05131 434 aaPredicted RBP1.34□□□□□ -2.2
YAR009CYAR009C YOL024WQ08172 172 aa1.34□□□□□ -2.2
YAR009CYAR009C BUD7Q08754 746 aa1.34□□□□□ -2.2
YAR009CYAR009C INP53Q12271 1107 aa1.34□□□□□ -2.2
YAR009CYAR009C RRD2Q12461 358 aa1.34□□□□□ -2.2
YAR009CYAR009C CDC24P11433 854 aaPredicted RBP1.33□□□□□ -2.2
YAR009CYAR009C VMA2P16140 517 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C GLN3P18494 730 aa1.33□□□□□ -2.2
YAR009CYAR009C UTH1P36135 365 aa1.33□□□□□ -2.2
YAR009CYAR009C MNN2P38069 597 aa1.33□□□□□ -2.2
YAR009CYAR009C PHO88P38264 188 aaPredicted RBP1.33□□□□□ -2.2
YAR009CYAR009C UIP3P39547 235 aa1.33□□□□□ -2.2
YAR009CYAR009C YIL152WP40455 235 aa1.33□□□□□ -2.2
YAR009CYAR009C MAF1P41910 395 aa1.33□□□□□ -2.2
YAR009CYAR009C ARC1P46672 376 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C YNL181WP53878 407 aa1.33□□□□□ -2.2
YAR009CYAR009C INA17Q02888 182 aa1.33□□□□□ -2.2
YAR009CYAR009C NUP53Q03790 475 aa1.33□□□□□ -2.2
YAR009CYAR009C PDS5Q04264 1277 aa1.33□□□□□ -2.2
YAR009CYAR009C PSR1Q07800 427 aa1.33□□□□□ -2.2
YAR009CYAR009C TCO89Q08921 799 aa1.33□□□□□ -2.2
YAR009CYAR009C SRO7Q12038 1033 aa1.33□□□□□ -2.2
YAR009CYAR009C TAH18Q12181 623 aa1.33□□□□□ -2.2
YAR009CYAR009C UTR4P32626 227 aa1.33□□□□□ -2.2
YAR009CYAR009C ARC40P38328 384 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C DIA4P38705 446 aaPredicted RBP1.33□□□□□ -2.2
YAR009CYAR009C YNG2P38806 282 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C SPT8P38915 602 aa1.33□□□□□ -2.2
YAR009CYAR009C FMP10P40098 244 aa1.33□□□□□ -2.2
YAR009CYAR009C SIP4P46954 829 aa1.33□□□□□ -2.2
YAR009CYAR009C YGL082WP53155 381 aa1.33□□□□□ -2.2
YAR009CYAR009C INN1P53901 409 aa1.33□□□□□ -2.2
YAR009CYAR009C ESBP6P53918 673 aa1.33□□□□□ -2.2
YAR009CYAR009C ARP9Q05123 467 aa1.33□□□□□ -2.2
YAR009CYAR009C YLR281CQ05863 155 aa1.33□□□□□ -2.2
YAR009CYAR009C ENT4Q07872 247 aa1.33□□□□□ -2.2
YAR009CYAR009C YPL278CQ08990 100 aa1.33□□□□□ -2.2
YAR009CYAR009C YOR111WQ99210 232 aa1.33□□□□□ -2.2
YAR009CYAR009C TOP1P04786 769 aa1.33□□□□□ -2.2
YAR009CYAR009C VMA16P23968 213 aa1.33□□□□□ -2.2
YAR009CYAR009C MCM10P32354 571 aa1.33□□□□□ -2.2
YAR009CYAR009C PDB1P32473 366 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C AGP2P38090 596 aa1.33□□□□□ -2.2
YAR009CYAR009C TIF5P38431 405 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C LEU5P38702 357 aa1.33□□□□□ -2.2
YAR009CYAR009C MET30P39014 640 aa1.33□□□□□ -2.2
YAR009CYAR009C YIL169CP40442 995 aa1.33□□□□□ -2.2
YAR009CYAR009C DPH1P40487 425 aaKnown RBP1.33□□□□□ -2.2
YAR009CYAR009C VID30P53076 958 aa1.33□□□□□ -2.2
YAR009CYAR009C MEP3P53390 489 aa1.33□□□□□ -2.2
YAR009CYAR009C RAD30Q04049 632 aa1.33□□□□□ -2.2
YAR009CYAR009C RTT109Q07794 436 aa1.33□□□□□ -2.2
YAR009CYAR009C ATG9Q12142 997 aa1.33□□□□□ -2.2
YAR009CYAR009C HSP42Q12329 375 aa1.33□□□□□ -2.2
YAR009CYAR009C YFL068WP0CX99 160 aa1.32□□□□□ -2.2
YAR009CYAR009C YLL066W-AP0CY00 160 aa1.32□□□□□ -2.2
YAR009CYAR009C YLL067W-AP0CY01 160 aa1.32□□□□□ -2.2
YAR009CYAR009C YCR043CP25361 127 aa1.32□□□□□ -2.2
YAR009CYAR009C KDX1P36005 433 aa1.32□□□□□ -2.2
YAR009CYAR009C SNU114P36048 1008 aaKnown RBP1.32□□□□□ -2.2
YAR009CYAR009C YPK3P38070 525 aa1.32□□□□□ -2.2
YAR009CYAR009C YBL029WP38201 376 aa1.32□□□□□ -2.2
YAR009CYAR009C RKM3P38222 552 aa1.32□□□□□ -2.2
YAR009CYAR009C PCF11P39081 626 aaPredicted RBP1.32□□□□□ -2.2
YAR009CYAR009C VID27P40157 782 aa1.32□□□□□ -2.2
YAR009CYAR009C HXT9P40885 567 aa1.32□□□□□ -2.2
YAR009CYAR009C IAH1P41734 238 aa1.32□□□□□ -2.2
YAR009CYAR009C TES1P41903 349 aaKnown RBP1.32□□□□□ -2.2
YAR009CYAR009C SAD1P43589 448 aa1.32□□□□□ -2.2
YAR009CYAR009C RPS7BP48164 190 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms