RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 CCDC144BQ3MJ40 725 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 GJC2Q5T442 439 aaPredicted RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 CREB3L3Q68CJ9 461 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 LHX8Q68G74 356 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 BLOC1S2Q6QNY1 142 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 SLC39A5Q6ZMH5 540 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 NLRX1Q86UT6 975 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 HOMER1Q86YM7 354 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 BICD2Q8TD16 824 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 RMDN3Q96TC7 470 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 UBE2OQ9C0C9 1292 aaKnown RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 PRDM5Q9NQX1 630 aaPredicted RBP8.22□□□□□ -1.09
MECP2-225ENST00000638041 ATP11BQ9Y2G3 1177 aa8.22□□□□□ -1.09
MECP2-225ENST00000638041 ZBTB43O43298 467 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 CDKL5O76039 1030 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 PARNO95453 639 aaKnown RBP8.21□□□□□ -1.1
MECP2-225ENST00000638041 RPLP2P05387 115 aaKnown RBP8.21□□□□□ -1.1
MECP2-225ENST00000638041 CASTP20810 708 aaKnown RBP8.21□□□□□ -1.1
MECP2-225ENST00000638041 CST5P28325 142 aaPredicted RBP8.21□□□□□ -1.1
MECP2-225ENST00000638041 BMP8BP34820 402 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 ALDH5A1P51649 535 aaPredicted RBP8.21□□□□□ -1.1
MECP2-225ENST00000638041 GJA9P57773 515 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 RPS6P62753 249 aaKnown RBP8.21□□□□□ -1.1
MECP2-225ENST00000638041 TRIM32Q13049 653 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 GRM4Q14833 912 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 LRRC41Q15345 812 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 TLK2Q86UE8 772 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 TMEM199Q8N511 208 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 OR6J1Q8NGC5 347 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 TOX2Q96NM4 488 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 SPZ1Q9BXG8 430 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 C22orf23Q9BZE7 217 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 WDR11Q9BZH6 1224 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 UBA5Q9GZZ9 404 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 INCENPQ9NQS7 918 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 TMEM39AQ9NV64 488 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 FLRT1Q9NZU1 646 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 RIPK3Q9Y572 518 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 MRVI1Q9Y6F6 885 aa8.21□□□□□ -1.1
MECP2-225ENST00000638041 COL11A1P12107 1806 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 PALM3A6NDB9 673 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 H0YGN5 161 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 SMIM22K7EJ46 135 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 NOP56O00567 594 aaKnown RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 CPLX1O14810 134 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 SLC27A2O14975 620 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 FOXP2O15409 715 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 MAFGO15525 162 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 DYNC1LI2O43237 492 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 ABCB7O75027 752 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 FOSP01100 380 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 GH1P01241 217 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 CLTBP09497 229 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 ZNF865P0CJ78 1059 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 GOLGA8HP0CJ92 632 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 GNAT1P11488 350 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 GNA11P29992 359 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 ADCYAP1R1P41586 468 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 ACLYP53396 1101 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 ATN1P54259 1190 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 RTP1P59025 263 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 CAP1Q01518 475 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 PTH1RQ03431 593 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 PTPN11Q06124 597 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 NEDD9Q14511 834 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 FSCN1Q16658 493 aaKnown RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 DGKDQ16760 1214 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 QRICH1Q2TAL8 776 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 DUSP28Q4G0W2 176 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 RPUSD2Q8IZ73 545 aaKnown RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 CCDC148Q8NFR7 591 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 MTG1Q9BT17 334 aaPredicted RBP8.2□□□□□ -1.1
MECP2-225ENST00000638041 PHF24Q9UPV7 400 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 CYP46A1Q9Y6A2 500 aa8.2□□□□□ -1.1
MECP2-225ENST00000638041 ZSWIM8A7E2V4 1837 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 PLXNA1Q9UIW2 1896 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 ZNFX1Q9P2E3 1918 aaKnown RBP8.19□□□□□ -1.1
MECP2-225ENST00000638041 A0A1W2PQ45 241 aaPredicted RBP8.19□□□□□ -1.1
MECP2-225ENST00000638041 A0A1W2PQY0 241 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 PEX10O60683 326 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 COL6A1P12109 1028 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 ACTN1P12814 892 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
MECP2-225ENST00000638041 CNTN2Q02246 1040 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 PPIGQ13427 754 aaKnown RBP eCLIP8.19□□□□□ -1.1
MECP2-225ENST00000638041 NECTIN1Q15223 517 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 KCNA10Q16322 511 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 RTN1Q16799 776 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 PRAMEF19Q5SWL8 479 aa8.19□□□□□ -1.1
MECP2-225ENST00000638041 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms