RNA–Protein interactions for RNA: ENST00000635798.1

AMT-223, Transcript of aminomethyltransferase, human

TSL 5

Gene AMT, Length 1,276 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-223	ENST00000635798	PDIA4	P13667	645 aa	Known RBP	13.37	□□□□□ -0.27
AMT-223	ENST00000635798	RXRA	P19793	462 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	GJB2	P29033	226 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	TROAP	Q12815	778 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	SKIV2L	Q15477	1246 aa	Known RBP	13.37	□□□□□ -0.27
AMT-223	ENST00000635798	RASIP1	Q5U651	963 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	NSUN7	Q8NE18	718 aa	Known RBP	13.37	□□□□□ -0.27
AMT-223	ENST00000635798	CTCFL	Q8NI51	663 aa	Predicted RBP	13.37	□□□□□ -0.27
AMT-223	ENST00000635798	HERVK_113	Q902F9	699 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	GINM1	Q9NU53	330 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	NYAP2	Q9P242	653 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	KIF3A	Q9Y496	699 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	ZDBF2	Q9HCK1	2354 aa		13.37	□□□□□ -0.27
AMT-223	ENST00000635798	ZNF318	Q5VUA4	2279 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	PTPDC1	A2A3K4	754 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	SLC15A5	A6NIM6	579 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	PQBP1	O60828	265 aa	Known RBP	13.36	□□□□□ -0.27
AMT-223	ENST00000635798	CTDNEP1	O95476	244 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	GH2	P01242	217 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	IGHA2	P01877	340 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	CDC27	P30260	824 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	KIF5B	P33176	963 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	ADD1	P35611	737 aa	Known RBP	13.36	□□□□□ -0.27
AMT-223	ENST00000635798	NUCB2	P80303	420 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	MTMR2	Q13614	643 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	SEPT2	Q15019	361 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	LRRC41	Q15345	812 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	RAB30	Q15771	203 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	CCDC144CP	Q8IYA2	1237 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	NPLOC4	Q8TAT6	608 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	MKL1	Q969V6	931 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	NKX2-4	Q9H2Z4	354 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	AS3MT	Q9HBK9	375 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.36	□□□□□ -0.27
AMT-223	ENST00000635798	TMEM39A	Q9NV64	488 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	CLIP2	Q9UDT6	1046 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	MSRA	Q9UJ68	235 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	SYNPO2	Q9UMS6	1093 aa		13.36	□□□□□ -0.27
AMT-223	ENST00000635798	SPTBN4	Q9H254	2564 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	BRWD1	Q9NSI6	2320 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	JAK2	O60674	1132 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	ASNS	P08243	561 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	HOXC6	P09630	235 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	IFNAR1	P17181	557 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	PDC	P20941	246 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	GUCY1A2	P33402	732 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	CAP2	P40123	477 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	GNAQ	P50148	359 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	ICA1	Q05084	483 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	RRP1B	Q14684	758 aa	Known RBP	13.35	□□□□□ -0.27
AMT-223	ENST00000635798	GRM4	Q14833	912 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	TMEM240	Q5SV17	173 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	C16orf59	Q7L2K0	433 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	FAM184A	Q8NB25	1140 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.35	□□□□□ -0.27
AMT-223	ENST00000635798	SLC28A3	Q9HAS3	691 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	TMOD4	Q9NZQ9	345 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	ZBTB21	Q9ULJ3	1066 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	STK36	Q9NRP7	1315 aa		13.35	□□□□□ -0.27
AMT-223	ENST00000635798	SEPT4	O43236	478 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	EEF2	P13639	858 aa	Known RBP	13.34	□□□□□ -0.27
AMT-223	ENST00000635798	PTPRE	P23469	700 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	BACE1	P56817	501 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	RAB3GAP1	Q15042	981 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	NTRK3	Q16288	839 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	TMTC3	Q6ZXV5	915 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	FBXL18	Q96ME1	805 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	WDR18	Q9BV38	432 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	ARHGEF10L	Q9HCE6	1279 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	CD320	Q9NPF0	282 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	PHF24	Q9UPV7	400 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	USP34	Q70CQ2	3546 aa		13.34	□□□□□ -0.27
AMT-223	ENST00000635798	CFAP54	Q96N23	3096 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	TIMP1	P01033	207 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	JAG1	P78504	1218 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	SSRP1	Q08945	709 aa	Known RBP	13.33	□□□□□ -0.28
AMT-223	ENST00000635798	FAAP100	Q0VG06	881 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	GRB14	Q14449	540 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.33	□□□□□ -0.28
AMT-223	ENST00000635798	WDR78	Q5VTH9	848 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	CLEC10A	Q8IUN9	316 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	TRIM22	Q8IYM9	498 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	LRRC47	Q8N1G4	583 aa	Known RBP	13.33	□□□□□ -0.28
AMT-223	ENST00000635798	DDX11	Q96FC9	970 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	UIMC1	Q96RL1	719 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	LZTS2	Q9BRK4	669 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	ORC3	Q9UBD5	711 aa	Predicted RBP	13.33	□□□□□ -0.28
AMT-223	ENST00000635798	COG5	Q9UP83	839 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	YBX2	Q9Y2T7	364 aa	Known RBP	13.33	□□□□□ -0.28
AMT-223	ENST00000635798	MYH6	P13533	1939 aa		13.33	□□□□□ -0.28
AMT-223	ENST00000635798	CNMD	O75829	334 aa		13.32	□□□□□ -0.28
AMT-223	ENST00000635798	PARP1	P09874	1014 aa	Known RBP	13.32	□□□□□ -0.28
AMT-223	ENST00000635798	SNHG28	P0DPA3	235 aa		13.32	□□□□□ -0.28
AMT-223	ENST00000635798	SYT1	P21579	422 aa		13.32	□□□□□ -0.28
AMT-223	ENST00000635798	CCNA1	P78396	465 aa		13.32	□□□□□ -0.28
AMT-223	ENST00000635798	PPIG	Q13427	754 aa	Known RBP eCLIP	13.32	□□□□□ -0.28	6e-7	■■■■□ 24.3
AMT-223	ENST00000635798	ASPRV1	Q53RT3	343 aa		13.32	□□□□□ -0.28
AMT-223	ENST00000635798	LARP1B	Q659C4	914 aa	Known RBP	13.32	□□□□□ -0.28
AMT-223	ENST00000635798	MFSD5	Q6N075	450 aa		13.32	□□□□□ -0.28
AMT-223	ENST00000635798	CCDC174	Q6PII3	467 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms