RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
RHOXF1P3-201ENST00000635058 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
RHOXF1P3-201ENST00000635058 FRMPD3Q5JV73 1810 aa11.69□□□□□ -0.54
RHOXF1P3-201ENST00000635058 WDR19Q8NEZ3 1342 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 RAD50Q92878 1312 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 NKRFO15226 690 aaKnown RBP eCLIP11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 KDM4AO75164 1064 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 CD4P01730 458 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 SNHG28P0DPA3 235 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 CSF2RAP15509 400 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TBC1D10CQ8IV04 446 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 RPUSD2Q8IZ73 545 aaKnown RBP11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PNMA1Q8ND90 353 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 RGS22Q8NE09 1264 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 EXOC6Q8TAG9 804 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ZKSCAN3Q9BRR0 538 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 DSCC1Q9BVC3 393 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 KRT23Q9C075 422 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MAF1Q9H063 256 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 HIPK3Q9H422 1215 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 CNNM2Q9H8M5 875 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ASTN1O14525 1302 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 KPNA6O60684 536 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 FGBP02675 491 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 FOSL2P15408 326 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 CYP2C18P33260 490 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 USH1GQ495M9 461 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TMEM240Q5SV17 173 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MCF2L2Q86YR7 1114 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 OR6J1Q8NGC5 347 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 CLEC4DQ8WXI8 215 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PURBQ96QR8 312 aaKnown RBP11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 UBAC1Q9BSL1 405 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 UBA5Q9GZZ9 404 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 IL23AQ9NPF7 189 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 DDX49Q9Y6V7 483 aaKnown RBP11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PLXNA1Q9UIW2 1896 aa11.67□□□□□ -0.54
RHOXF1P3-201ENST00000635058 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 B4E1Z4 1266 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MYL3P08590 195 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PARP1P09874 1014 aaKnown RBP11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 GOLGA8HP0CJ92 632 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 DNAJB2P25686 324 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TRDNQ13061 729 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PPP2R5BQ15173 497 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ASPRV1Q53RT3 343 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MYLIPQ8WY64 445 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ANKS1AQ92625 1134 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TIFAQ96CG3 184 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TTYH1Q9H313 450 aaPredicted RBP11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MSRAQ9UJ68 235 aa11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MRPL11Q9Y3B7 192 aaKnown RBP11.66□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ABCB11O95342 1321 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 NEDD4P46934 1319 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ACRP10323 421 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TXNP10599 105 aaKnown RBP11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 PSMC6P62333 389 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 CDC37Q16543 378 aaPredicted RBP11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 FAM47CQ5HY64 1035 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 IFIT1BQ5T764 474 aaKnown RBP11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 FBXO11Q86XK2 927 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ADGRF4Q8IZF3 695 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 MTG1Q9BT17 334 aaPredicted RBP11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 TRPV6Q9H1D0 765 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ALDH8A1Q9H2A2 487 aaPredicted RBP11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 ZNF576Q9H609 170 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 VAT1LQ9HCJ6 419 aa11.65□□□□□ -0.54
RHOXF1P3-201ENST00000635058 GRIN2DO15399 1336 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 COL6A3P12111 3177 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 B4GALT4O60513 344 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 CCL23P55773 120 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 TRAF1Q13077 416 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 RAB30Q15771 203 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 TMEM63BQ5T3F8 832 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 ENAHQ8N8S7 591 aaPredicted RBP11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 HERVK_113Q902F9 699 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 IWS1Q96ST2 819 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
RHOXF1P3-201ENST00000635058 TNKSO95271 1327 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms