RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ERCC3P19447 782 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 CUL4BQ13620 913 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 LRRN4CLQ8ND94 238 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.333e-6■■■■□ 20.2
ATRX-214ENST00000624166 AGXT2Q9BYV1 514 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 GEMIN8Q9NWZ8 242 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 KLHL14Q9P2G3 628 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 TFAP4Q01664 338 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 TRAF1Q13077 416 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 C10orf76Q5T2E6 689 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 LRRC31Q6UY01 552 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 NOA1Q8NC60 698 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 CCHCR1Q8TD31 782 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 GLT8D2Q9H1C3 349 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 NDST4Q9H3R1 872 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 INTS9Q9NV88 658 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 PCDHA4Q9UN74 947 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 SPOPO43791 374 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 ZPR1O75312 459 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 STAG1Q8WVM7 1258 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 DPH5Q9H2P9 285 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 SASH3O75995 380 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 SUN1O94901 812 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 CASP1P29466 404 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 STAT1P42224 750 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 SPATA4Q8NEY3 305 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 NLRP3Q96P20 1036 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 GREM2Q9H772 168 aa12.99□□□□□ -0.33
ATRX-214ENST00000624166 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
ATRX-214ENST00000624166 ARHGEF28Q8N1W1 1705 aaKnown RBP12.98□□□□□ -0.33
ATRX-214ENST00000624166 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 LDHBP07195 334 aaKnown RBP12.98□□□□□ -0.33
ATRX-214ENST00000624166 TECP42680 631 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 PRCPP42785 496 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 CCDC38Q502W7 563 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 FAM47AQ5JRC9 791 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 FRMD4BQ9Y2L6 1034 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 KIF20BQ96Q89 1820 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 SERPING1P05155 500 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 FKBP3Q00688 224 aaKnown RBP12.98□□□□□ -0.33
ATRX-214ENST00000624166 HIBCHQ6NVY1 386 aaPredicted RBP12.98□□□□□ -0.33
ATRX-214ENST00000624166 STMN2Q93045 179 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 RUNDC3BQ96NL0 473 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 CXorf56Q9H5V9 222 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 SNX12Q9UMY4 172 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 CCDC188H7C350 402 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 GYPCP04921 128 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 ADCY7P51828 1080 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 NLRP14Q86W24 1093 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 PNMA1Q8ND90 353 aa12.98□□□□□ -0.33
ATRX-214ENST00000624166 PIH1D3Q9NQM4 214 aaKnown RBP12.98□□□□□ -0.33
ATRX-214ENST00000624166 ARMCX3Q9UH62 379 aaPredicted RBP12.98□□□□□ -0.33
ATRX-214ENST00000624166 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 GMNCA6NCL1 334 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 PPP1R37O75864 691 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 MCAMP43121 646 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 FAM26FQ5R3K3 315 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 GSTA5Q7RTV2 222 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 TCP11Q8WWU5 503 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATRX-214ENST00000624166 CTTNBP2NLQ9P2B4 639 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 NOVA2Q9UNW9 492 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 RPSAP08865 295 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 STX2P32856 288 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 PTPAQ15257 358 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 FYB2Q5VWT5 728 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 AP1ARQ63HQ0 302 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 ATP6V1G3Q96LB4 118 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 CHP1Q99653 195 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 IQCGQ9H095 443 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 KLC4Q9NSK0 619 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 STK17AQ9UEE5 414 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATRX-214ENST00000624166 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 NEDD4P46934 1319 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 MAP2K7O14733 419 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
ATRX-214ENST00000624166 SMC6Q96SB8 1091 aa12.97□□□□□ -0.33
ATRX-214ENST00000624166 STK38LQ9Y2H1 464 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms