RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MIIPQ5JXC2 388 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 CREG2Q8IUH2 290 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 TRIM9Q9C026 710 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 NLRC4Q9NPP4 1024 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 MKRN1Q9UHC7 482 aaKnown RBP17.56■□□□□ 0.4
NPHP4-211ENST00000622020 MYH13Q9UKX3 1938 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 MYH10P35580 1976 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 ZSCAN5CA6NGD5 496 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-211ENST00000622020 LIG3P49916 1009 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 ATP1A2P50993 1020 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 ARID5AQ03989 594 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 DIXDC1Q155Q3 683 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 MEA1Q16626 185 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 TTC31Q49AM3 519 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-211ENST00000622020 GLIS3Q8NEA6 775 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 SALL4Q9UJQ4 1053 aa17.56■□□□□ 0.4
NPHP4-211ENST00000622020 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 PPFIA4O75335 1185 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 APBA1Q02410 837 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 RASSF7Q02833 373 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
NPHP4-211ENST00000622020 SH2D3CQ8N5H7 860 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 EHBP1Q8NDI1 1231 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 PCDHA13Q9Y5I0 950 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
NPHP4-211ENST00000622020 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 CCNE1P24864 410 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 AARSP49588 968 aaKnown RBP eCLIP17.55■□□□□ 0.4
NPHP4-211ENST00000622020 VAV2P52735 878 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 NAPAP54920 295 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 GJA10Q969M2 543 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
NPHP4-211ENST00000622020 BIN2Q9UBW5 565 aaPredicted RBP17.55■□□□□ 0.4
NPHP4-211ENST00000622020 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 MAGEA9P43362 315 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 KIF11P52732 1056 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 SIK1P57059 783 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-211ENST00000622020 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
NPHP4-211ENST00000622020 BCAS4Q8TDM0 211 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 IFT81Q8WYA0 676 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 ARL8AQ96BM9 186 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 VIPAS39Q9H9C1 493 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 SNX12Q9UMY4 172 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 MCM3P25205 808 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 PARP10Q53GL7 1025 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 TDRD12Q587J7 1177 aaKnown RBP17.54■□□□□ 0.4
NPHP4-211ENST00000622020 CCDC70Q6NSX1 233 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
NPHP4-211ENST00000622020 KIAA0895Q8NCT3 520 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
NPHP4-211ENST00000622020 PACSIN2Q9UNF0 486 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-211ENST00000622020 LRRC53A6NM62 1247 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 TACC1O75410 805 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 IRAK1P51617 712 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 GNGT1P63211 74 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 KCNB1Q14721 858 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 USP17L2Q6R6M4 530 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 ORC4O43929 436 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 ZEB2O60315 1214 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 KRT14P02533 472 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 FGRP09769 529 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 OSBPL9Q96SU4 736 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 UBA5Q9GZZ9 404 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 TMEM260Q9NX78 707 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 TBC1D7Q9P0N9 293 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 SHANK3Q9BYB0 1731 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 ADAMTS2O95450 1211 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 HIBADHP31937 336 aaKnown RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 NOP2P46087 812 aaKnown RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 MSL3Q8N5Y2 521 aaKnown RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 TGFBRAP1Q8WUH2 860 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 DHTKD1Q96HY7 919 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-211ENST00000622020 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
NPHP4-211ENST00000622020 STRCP1A6NGW2 1772 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 RPS6KA5O75582 802 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 MAGEA1P43355 309 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 CORO7P57737 925 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 DNAAF5Q86Y56 855 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 MAPKAPK5Q8IW41 473 aa17.52■□□□□ 0.4
NPHP4-211ENST00000622020 CCDC47Q96A33 483 aaKnown RBP17.52■□□□□ 0.4
NPHP4-211ENST00000622020 BCORQ6W2J9 1755 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.39
NPHP4-211ENST00000622020 SMCO2A6NFE2 343 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 KLRF2D3W0D1 207 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 GUCY2FP51841 1108 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 CCDC170Q8IYT3 715 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 SH3RF3Q8TEJ3 882 aaPredicted RBP17.52■□□□□ 0.39
NPHP4-211ENST00000622020 NUP58Q9BVL2 599 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 NDST4Q9H3R1 872 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 RBM12Q9NTZ6 932 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms