RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GAKO14976 1311 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 PALM3A6NDB9 673 aaPredicted RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 BTBD18B2RXH4 712 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 MPHOSPH10O00566 681 aaKnown RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 MAP3K13O43283 966 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 SASH3O75995 380 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 BMP15O95972 392 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CDC27P30260 824 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CKAP4Q07065 602 aaKnown RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 KCNA1Q09470 495 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 SPATA1Q5VX52 437 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 TC2NQ8N9U0 490 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 FANCBQ8NB91 859 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CCDC47Q96A33 483 aaKnown RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 FUT8Q9BYC5 575 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 MED4Q9NPJ6 270 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 GUCA1BQ9UMX6 200 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 PCDHAC2Q9Y5I4 1007 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 ANKRD31Q8N7Z5 1873 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 C10orf71Q711Q0 1435 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 ORC4O43929 436 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 CDK8P49336 464 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 RBL2Q08999 1139 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 STIM1Q13586 685 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 RRAGBQ5VZM2 374 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 CYP26C1Q6V0L0 522 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 SLC35F6Q8N357 371 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 AFAP1L1Q8TED9 768 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 TDRD3Q9H7E2 651 aaKnown RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 EFCC1Q9HA90 598 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 PSD3Q9NYI0 1048 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 KCNJ14Q9UNX9 436 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 HPSEQ9Y251 543 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 PSMD14O00487 310 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 TRIM14Q14142 442 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 DLGAP5Q15398 846 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 QPCTQ16769 361 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 APOBEC3HQ6NTF7 200 aaKnown RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 PPM1EQ8WY54 764 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 ABCB6Q9NP58 842 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 CABP5Q9NP86 173 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 ZNRF3Q9ULT6 936 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 SHTN1A0MZ66 631 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 YDJCA8MPS7 323 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 TULP2O00295 520 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 TBC1D12O60347 775 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 DEXIO95424 95 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 MNX1P50219 401 aaPredicted RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 IRX3P78415 501 aaPredicted RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 NFIAQ12857 509 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 RSRC2Q7L4I2 434 aaKnown RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 GRAMD1CQ8IYS0 662 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 IRX2Q9BZI1 471 aaPredicted RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 VEZTQ9HBM0 779 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 ADGRG1Q9Y653 693 aa7.81□□□□□ -1.16
SRGAP3-213ENST00000618999 SLX4Q8IY92 1834 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 MYH13Q9UKX3 1938 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CLRN2A0PK11 232 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 H0YHG0 523 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 FOXN1O15353 648 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CASP14P31944 242 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CASP8Q14790 479 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 MTF1Q14872 753 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 SRLQ86TD4 932 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 MTA3Q9BTC8 594 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 DDX4Q9NQI0 724 aaKnown RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 SERPINB13Q9UIV8 391 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CTNND2Q9UQB3 1225 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CD2APQ9Y5K6 639 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 GJA3Q9Y6H8 435 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CACNA1SQ13698 1873 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 hCG_1642624A0A1W2PR95 340 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 USP8P40818 1118 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 RSBN1LQ6PCB5 846 aaPredicted RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 VTI1AQ96AJ9 217 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 MS4A4AQ96JQ5 239 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 ZDHHC15Q96MV8 337 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 PHOX2BQ99453 314 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 SLF1Q9BQI6 1058 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 PYM1Q9BRP8 204 aaKnown RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 VPS16Q9H269 839 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 MRPL44Q9H9J2 332 aaKnown RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 SPON1Q9HCB6 807 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 MYO6Q9UM54 1294 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 ARIH1Q9Y4X5 557 aaPredicted RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CASZ1Q86V15 1759 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 PEX14O75381 377 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CALM1P0DP23 149 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CALM2P0DP24 149 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 CALM3P0DP25 149 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 KRT9P35527 623 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 FMR1Q06787 632 aaKnown RBP eCLIP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 SEC23AQ15436 765 aa7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 DNAJC21Q5F1R6 531 aaKnown RBP7.8□□□□□ -1.16
SRGAP3-213ENST00000618999 PRMT6Q96LA8 375 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms