RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 GIMAP1Q8WWP7 306 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SLC7A3Q8WY07 619 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 UBXN4Q92575 508 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 EDEM1Q92611 657 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 CUL5Q93034 780 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 PPP2R3CQ969Q6 453 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SLC35B4Q969S0 331 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 UTP4Q969X6 686 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 NACC2Q96BF6 587 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 EVI5LQ96CN4 794 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SPDL1Q96EA4 605 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 DHTKD1Q96HY7 919 aaPredicted RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 NAP1L3Q99457 506 aaPredicted RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 PBX4Q9BYU1 374 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 BRD8Q9H0E9 1235 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ZWILCHQ9H900 591 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SEC31BQ9NQW1 1179 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SH2B1Q9NRF2 756 aaPredicted RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 EXOC1Q9NV70 894 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 TBC1D7Q9P0N9 293 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 DKK3Q9UBP4 350 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SEPT3Q9UH03 358 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 CIDEBQ9UHD4 219 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 TMCO1Q9UM00 188 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ITM2BQ9Y287 266 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 RAXQ9Y2V3 346 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ATP6V0A2Q9Y487 856 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 FAM169AQ9Y6X4 670 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 NPATQ14207 1427 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SH3TC1Q8TE82 1336 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ZNF644Q9H582 1327 aaPredicted RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 LAMC3Q9Y6N6 1575 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 LRRC10BA6NIK2 292 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 GOLGA8AA7E2F4 631 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 H3BQF6 201 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 ZEB2O60315 1214 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 MTRF1O75570 445 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 RASSF9O75901 435 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 KIF4AO95239 1232 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 CAVIN2O95810 425 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 MMEP08473 750 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 MSL3P1P0C860 447 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 RPL17P18621 184 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 MX1P20591 662 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 SYT1P21579 422 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 USP5P45974 858 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 AARSP49588 968 aaKnown RBP eCLIP3.94□□□□□ -1.78
SMC5-204ENST00000618375 ARL4DP49703 201 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 USP11P51784 963 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 NEK2P51955 445 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 HDAC4P56524 1084 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 EIF2B5Q13144 721 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 SNX1Q13596 522 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 CUL4BQ13620 913 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 KCNB1Q14721 858 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 SNCBQ16143 134 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 ERCC6LQ2NKX8 1250 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 KIF4BQ2VIQ3 1234 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 LRRFIP1Q32MZ4 808 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 USH1GQ495M9 461 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 CCDC152Q4G0S7 254 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 PARP10Q53GL7 1025 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 BMP2KLQ5H9B9 411 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 LARP1BQ659C4 914 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 MIS18BP1Q6P0N0 1132 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 SARM1Q6SZW1 724 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 B4GALNT4Q76KP1 1039 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 ARMC9Q7Z3E5 817 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 LUZP1Q86V48 1076 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 PEX5LQ8IYB4 626 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 GALNT11Q8NCW6 608 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 CNNM3Q8NE01 707 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 KLHDC4Q8TBB5 520 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 NEK9Q8TD19 979 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 CCHCR1Q8TD31 782 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 MORC4Q8TE76 937 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 RABGGTAQ92696 567 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 RUFY1Q96T51 708 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 GBP3Q9H0R5 595 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 VCPKMTQ9H867 229 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 VIPAS39Q9H9C1 493 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 ACTR5Q9H9F9 607 aaPredicted RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 SLC39A2Q9NP94 309 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 VPS18Q9P253 973 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 DDX25Q9UHL0 483 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 PUF60Q9UHX1 559 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 PNMA2Q9UL42 364 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 TPX2Q9ULW0 747 aaKnown RBP3.94□□□□□ -1.78
SMC5-204ENST00000618375 RABL2BQ9UNT1 228 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 BIVM-ERCC5R4GMW8 1640 aa3.94□□□□□ -1.78
SMC5-204ENST00000618375 PCF11O94913 1555 aaKnown RBP3.93□□□□□ -1.78
SMC5-204ENST00000618375 MYOM2P54296 1465 aa3.93□□□□□ -1.78
SMC5-204ENST00000618375 GOLGA6L7A0A1B0GV03 622 aa3.93□□□□□ -1.78
SMC5-204ENST00000618375 SRRM3A6NNA2 597 aaPredicted RBP3.93□□□□□ -1.78
SMC5-204ENST00000618375 ENO4A6NNW6 628 aa3.93□□□□□ -1.78
SMC5-204ENST00000618375 SH3BP5O60239 455 aa3.93□□□□□ -1.78
SMC5-204ENST00000618375 MGRN1O60291 552 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms