RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 RBM6P78332 1123 aaKnown RBP20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 RPS6KC1Q96S38 1066 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 LAD1O00515 517 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 COBLO75128 1261 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 GCFC2P16383 781 aaKnown RBP20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 PPARDQ03181 441 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 TFDP1Q14186 410 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 CEP170P1Q96L14 293 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 MNAT1P51948 309 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 PPP2R5CQ13362 524 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 PPP2R5AQ15172 486 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 AOC3Q16853 763 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 SLC10A4Q96EP9 437 aa20.34■□□□□ 0.85
AC008878.3-201ENST00000617428 LONRF2Q1L5Z9 754 aa20.33■□□□□ 0.85
AC008878.3-201ENST00000617428 ABT1Q9ULW3 272 aaKnown RBP20.33■□□□□ 0.85
AC008878.3-201ENST00000617428 CD2APQ9Y5K6 639 aa20.33■□□□□ 0.85
AC008878.3-201ENST00000617428 MYCP01106 439 aaPredicted RBP20.33■□□□□ 0.85
AC008878.3-201ENST00000617428 MINPP1Q9UNW1 487 aa20.33■□□□□ 0.85
AC008878.3-201ENST00000617428 A0A1W2PQ27 194 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 A0A1W2PQ64 194 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 A0A1W2PQD8 194 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 KCNQ2O43526 872 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 GH2P01242 217 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 FEZ2Q9UHY8 353 aaPredicted RBP20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 PDE6CP51160 858 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 KDM6BO15054 1643 aa20.33■□□□□ 0.84
AC008878.3-201ENST00000617428 MEIS1O00470 390 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 RIOK3O14730 519 aaKnown RBP20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 GIPC1O14908 333 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 ABI1Q8IZP0 508 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 STRBPQ96SI9 672 aaKnown RBP20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 NR2F2P24468 414 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 LRRC41Q15345 812 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 CDHR1Q96JP9 859 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 GSDMAQ96QA5 445 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 JPH2Q9BR39 696 aaPredicted RBP20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 EXOC3L4Q17RC7 722 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 ZNF341Q9BYN7 854 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 ASNSP08243 561 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 EIF2AK2P19525 551 aaKnown RBP20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 AK8Q96MA6 479 aa20.32■□□□□ 0.84
AC008878.3-201ENST00000617428 H2AFZP0C0S5 128 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 CDC37Q16543 378 aaPredicted RBP20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 UBE2SQ16763 222 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 H2AFVQ71UI9 128 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 SAR1BQ9Y6B6 198 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 KRT81Q14533 505 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 MAIP1Q8WWC4 291 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 ABCC3O15438 1527 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 FTOQ9C0B1 505 aaKnown RBP eCLIP20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 MAGEF1Q9HAY2 307 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 KCNK3O14649 394 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 MMP1P03956 469 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 HOXA13P31271 388 aaPredicted RBP20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 LIFRP42702 1097 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 PAK2Q13177 524 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 BIRC2Q13490 618 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 RSPH3Q86UC2 560 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 TRIM50Q86XT4 487 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 ANKRD13CQ8N6S4 541 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 RETREG2Q8NC44 543 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 NACC1Q96RE7 527 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 CUEDC2Q9H467 287 aa20.31■□□□□ 0.84
AC008878.3-201ENST00000617428 SYNMO15061 1565 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 BUB1O43683 1085 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 KRT15P19012 456 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 VPS41P49754 854 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 AIFM3Q96NN9 605 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 CD209Q9NNX6 404 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 DISC1Q9NRI5 854 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 PPP6R2O75170 966 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 ELF2Q15723 593 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 HADHQ16836 314 aaKnown RBP20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 TRIM58Q8NG06 486 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 PFDN4Q9NQP4 134 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 POLR3EQ9NVU0 708 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 FAM184BQ9ULE4 1060 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 POLR2BP30876 1174 aaKnown RBP20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 SNAP25P60880 206 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 CNOT6LQ96LI5 555 aaKnown RBP20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 KMT5AQ9NQR1 393 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 HAUS2Q9NVX0 235 aa20.3■□□□□ 0.84
AC008878.3-201ENST00000617428 CRKP46108 304 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 SND1Q7KZF4 910 aaKnown RBP eCLIP20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 RSAD2Q8WXG1 361 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 TUBGCP2Q9BSJ2 902 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 RAB20Q9NX57 234 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 hCG_1984214I3L0E3 225 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 STAM2O75886 525 aa20.29■□□□□ 0.84
AC008878.3-201ENST00000617428 CYP19A1P11511 503 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms