RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GALNT17Q6IS24 598 aa8.83□□□□□ -1
NEK3-207ENST00000617054 FAM83AQ86UY5 434 aa8.83□□□□□ -1
NEK3-207ENST00000617054 FCHSD1Q86WN1 690 aa8.83□□□□□ -1
NEK3-207ENST00000617054 CUL5Q93034 780 aa8.83□□□□□ -1
NEK3-207ENST00000617054 FEZ1Q99689 392 aa8.83□□□□□ -1
NEK3-207ENST00000617054 ARHGEF10LQ9HCE6 1279 aa8.83□□□□□ -1
NEK3-207ENST00000617054 RIC8AQ9NPQ8 531 aa8.83□□□□□ -1
NEK3-207ENST00000617054 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
NEK3-207ENST00000617054 TMX2Q9Y320 296 aa8.83□□□□□ -1
NEK3-207ENST00000617054 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
NEK3-207ENST00000617054 STAT2P52630 851 aa8.83□□□□□ -1
NEK3-207ENST00000617054 GMCL1P1Q8NEA9 526 aa8.83□□□□□ -1
NEK3-207ENST00000617054 SMARCE1Q969G3 411 aa8.83□□□□□ -1
NEK3-207ENST00000617054 MTMR8Q96EF0 704 aa8.83□□□□□ -1
NEK3-207ENST00000617054 MEIS2O14770 477 aa8.82□□□□□ -1
NEK3-207ENST00000617054 SLFN14P0C7P3 912 aa8.82□□□□□ -1
NEK3-207ENST00000617054 FMR1Q06787 632 aaKnown RBP eCLIP8.82□□□□□ -1
NEK3-207ENST00000617054 ARID5BQ14865 1188 aa8.82□□□□□ -1
NEK3-207ENST00000617054 FBXO11Q86XK2 927 aa8.82□□□□□ -1
NEK3-207ENST00000617054 DHX37Q8IY37 1157 aaKnown RBP8.82□□□□□ -1
NEK3-207ENST00000617054 CYP2W1Q8TAV3 490 aa8.82□□□□□ -1
NEK3-207ENST00000617054 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
NEK3-207ENST00000617054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.82□□□□□ -1
NEK3-207ENST00000617054 OPLAHO14841 1288 aa8.82□□□□□ -1
NEK3-207ENST00000617054 TRIM66O15016 1216 aa8.82□□□□□ -1
NEK3-207ENST00000617054 BMP15O95972 392 aa8.82□□□□□ -1
NEK3-207ENST00000617054 CFBP00751 764 aa8.82□□□□□ -1
NEK3-207ENST00000617054 OR52Z1P0C646 297 aa8.82□□□□□ -1
NEK3-207ENST00000617054 YBX3P16989 372 aaKnown RBP eCLIP8.82□□□□□ -1
NEK3-207ENST00000617054 UBA7P41226 1012 aa8.82□□□□□ -1
NEK3-207ENST00000617054 NCAPHQ15003 741 aa8.82□□□□□ -1
NEK3-207ENST00000617054 CPXCR1Q8N123 301 aa8.82□□□□□ -1
NEK3-207ENST00000617054 GMCL1Q96IK5 515 aa8.82□□□□□ -1
NEK3-207ENST00000617054 SYT17Q9BSW7 474 aa8.82□□□□□ -1
NEK3-207ENST00000617054 GGA3Q9NZ52 723 aa8.82□□□□□ -1
NEK3-207ENST00000617054 H7C1D1 291 aa8.81□□□□□ -1
NEK3-207ENST00000617054 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 STAT6P42226 847 aa8.81□□□□□ -1
NEK3-207ENST00000617054 CLK2P49760 499 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 ZNF75DP51815 510 aa8.81□□□□□ -1
NEK3-207ENST00000617054 MRPL12P52815 198 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 CALCRLQ16602 461 aa8.81□□□□□ -1
NEK3-207ENST00000617054 NAALADL2Q58DX5 795 aa8.81□□□□□ -1
NEK3-207ENST00000617054 EEF2KMTQ96G04 330 aa8.81□□□□□ -1
NEK3-207ENST00000617054 MED15Q96RN5 788 aa8.81□□□□□ -1
NEK3-207ENST00000617054 AMNQ9BXJ7 453 aa8.81□□□□□ -1
NEK3-207ENST00000617054 NAT10Q9H0A0 1025 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 HSD3B7Q9H2F3 369 aa8.81□□□□□ -1
NEK3-207ENST00000617054 FANCLQ9NW38 375 aa8.81□□□□□ -1
NEK3-207ENST00000617054 PTGS1P23219 599 aa8.81□□□□□ -1
NEK3-207ENST00000617054 SARSP49591 514 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 LRMPQ12912 555 aa8.81□□□□□ -1
NEK3-207ENST00000617054 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
NEK3-207ENST00000617054 ARL6IP4Q66PJ3 421 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
NEK3-207ENST00000617054 IQUBQ8NA54 791 aa8.81□□□□□ -1
NEK3-207ENST00000617054 RETREG2Q8NC44 543 aa8.81□□□□□ -1
NEK3-207ENST00000617054 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
NEK3-207ENST00000617054 GOPCQ9HD26 462 aa8.81□□□□□ -1
NEK3-207ENST00000617054 HOMER2Q9NSB8 354 aa8.81□□□□□ -1
NEK3-207ENST00000617054 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 ESYT2A0FGR8 921 aa8.81□□□□□ -1
NEK3-207ENST00000617054 MARCH6O60337 910 aa8.81□□□□□ -1
NEK3-207ENST00000617054 LONP1P36776 959 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 SPP2Q13103 211 aa8.81□□□□□ -1
NEK3-207ENST00000617054 MTMR2Q13614 643 aa8.81□□□□□ -1
NEK3-207ENST00000617054 FKBP1CQ5VVH2 108 aa8.81□□□□□ -1
NEK3-207ENST00000617054 RRAGBQ5VZM2 374 aa8.81□□□□□ -1
NEK3-207ENST00000617054 CCDC186Q7Z3E2 898 aa8.81□□□□□ -1
NEK3-207ENST00000617054 FILIP1Q7Z7B0 1213 aa8.81□□□□□ -1
NEK3-207ENST00000617054 CREBRFQ8IUR6 639 aa8.81□□□□□ -1
NEK3-207ENST00000617054 DPF2Q92785 391 aa8.81□□□□□ -1
NEK3-207ENST00000617054 VCPKMTQ9H867 229 aa8.81□□□□□ -1
NEK3-207ENST00000617054 DISC1Q9NRI5 854 aa8.81□□□□□ -1
NEK3-207ENST00000617054 RNF181Q9P0P0 153 aa8.81□□□□□ -1
NEK3-207ENST00000617054 DDX25Q9UHL0 483 aaKnown RBP8.81□□□□□ -1
NEK3-207ENST00000617054 TBC1D12O60347 775 aa8.8□□□□□ -1
NEK3-207ENST00000617054 SMC2O95347 1197 aa8.8□□□□□ -1
NEK3-207ENST00000617054 ASNSP08243 561 aa8.8□□□□□ -1
NEK3-207ENST00000617054 PLCG1P19174 1290 aa8.8□□□□□ -1
NEK3-207ENST00000617054 LMNB1P20700 586 aa8.8□□□□□ -1
NEK3-207ENST00000617054 RPS12P25398 132 aaKnown RBP8.8□□□□□ -1
NEK3-207ENST00000617054 STAT3P40763 770 aa8.8□□□□□ -1
NEK3-207ENST00000617054 DPYDQ12882 1025 aa8.8□□□□□ -1
NEK3-207ENST00000617054 ZSCAN30Q86W11 494 aa8.8□□□□□ -1
NEK3-207ENST00000617054 PLA2G4DQ86XP0 818 aa8.8□□□□□ -1
NEK3-207ENST00000617054 HAS1Q92839 578 aa8.8□□□□□ -1
NEK3-207ENST00000617054 HPS3Q969F9 1004 aa8.8□□□□□ -1
NEK3-207ENST00000617054 WNK4Q96J92 1243 aa8.8□□□□□ -1
NEK3-207ENST00000617054 WRNIP1Q96S55 665 aa8.8□□□□□ -1
NEK3-207ENST00000617054 MMTAG2Q9BU76 263 aaKnown RBP8.8□□□□□ -1
NEK3-207ENST00000617054 GPRC5DQ9NZD1 345 aa8.8□□□□□ -1
NEK3-207ENST00000617054 IFNKQ9P0W0 207 aa8.8□□□□□ -1
NEK3-207ENST00000617054 MSNP26038 577 aaKnown RBP8.8□□□□□ -1
NEK3-207ENST00000617054 ECM1Q16610 540 aa8.8□□□□□ -1
NEK3-207ENST00000617054 PRR16Q569H4 304 aa8.8□□□□□ -1
NEK3-207ENST00000617054 PPP4R3BQ5MIZ7 849 aa8.8□□□□□ -1
NEK3-207ENST00000617054 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
NEK3-207ENST00000617054 CABP7Q86V35 215 aa8.8□□□□□ -1
NEK3-207ENST00000617054 NLRP7Q8WX94 980 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms