RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 KBTBD3Q8NAB2 608 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 LRRCC1Q9C099 1032 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 CYP39A1Q9NYL5 469 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 TET1Q8NFU7 2136 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 MYL3P08590 195 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 CPT1AP50416 773 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 MUM1L1Q5H9M0 696 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 KRT40Q6A162 431 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 GMCL1Q96IK5 515 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 GPHNQ9NQX3 736 aaPredicted RBP20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 CCPG1Q9ULG6 757 aa20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 ARIH1Q9Y4X5 557 aaPredicted RBP20.43■□□□□ 0.86
CSNK1E-215ENST00000612795 EPOPA6NHQ4 379 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 KIF28PB7ZC32 967 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 SLC3A2P08195 630 aaKnown RBP20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 MCCP23508 829 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 RFC2P35250 354 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 SNAP25P60880 206 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 DUSP28Q4G0W2 176 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 KCTD1Q719H9 257 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 PHOSPHO2Q8TCD6 241 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 HLA-CQ95604 372 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 ECHDC1Q9NTX5 307 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 ZBTB40Q9NUA8 1239 aa20.42■□□□□ 0.86
CSNK1E-215ENST00000612795 RNF113AO15541 343 aaKnown RBP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 SMARCA5O60264 1052 aaPredicted RBP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 ZFYP08048 801 aaPredicted RBP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 PURAQ00577 322 aaKnown RBP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 TFAP4Q01664 338 aa20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 TAP1Q03518 808 aa20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 MTG1Q9BT17 334 aaPredicted RBP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 WDR11Q9BZH6 1224 aa20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 NACAP1Q9BZK3 213 aa20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 FTOQ9C0B1 505 aaKnown RBP eCLIP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 ADD3Q9UEY8 706 aaKnown RBP20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 STX8Q9UNK0 236 aa20.41■□□□□ 0.86
CSNK1E-215ENST00000612795 M0R2C6 588 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 TLL1O43897 1013 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 BRDTQ58F21 947 aaPredicted RBP20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 PPP4R3BQ5MIZ7 849 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 HERC6Q8IVU3 1022 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 IFNL3Q8IZI9 196 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 RETREG2Q8NC44 543 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 OR6J1Q8NGC5 347 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 RAD50Q92878 1312 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 PURBQ96QR8 312 aaKnown RBP20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 PRR12Q9ULL5 1215 aa20.4■□□□□ 0.86
CSNK1E-215ENST00000612795 BRWD1Q9NSI6 2320 aa20.39■□□□□ 0.86
CSNK1E-215ENST00000612795 SIP14410 1827 aa20.39■□□□□ 0.86
CSNK1E-215ENST00000612795 PITPNM1O00562 1244 aa20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 PLA2G6O60733 806 aa20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 ALDH5A1P51649 535 aaPredicted RBP20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 GRB10Q13322 594 aa20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 MORC4Q8TE76 937 aa20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 MTMR7Q9Y216 660 aa20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 NOD1Q9Y239 953 aa20.39■□□□□ 0.85
CSNK1E-215ENST00000612795 PATL2C9JE40 543 aaKnown RBP20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 ARHGEF15O94989 841 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 IQCF3P0C7M6 154 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 KCNJ6P48051 423 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 CCDC96Q2M329 555 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 NBPF20Q3BBV1 942 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 RCSD1Q6JBY9 416 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 NAPBQ9H115 298 aa20.38■□□□□ 0.85
CSNK1E-215ENST00000612795 BAIAP3O94812 1187 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 ICAM1P05362 532 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 PPARAQ07869 468 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 BFSP2Q13515 415 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 BAATQ14032 418 aaPredicted RBP20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 LRRFIP1Q32MZ4 808 aaKnown RBP20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 PPP1R13LQ8WUF5 828 aa20.37■□□□□ 0.85
CSNK1E-215ENST00000612795 PTPDC1A2A3K4 754 aa20.36■□□□□ 0.85
CSNK1E-215ENST00000612795 FAM86C2PA6NEL3 165 aa20.36■□□□□ 0.85
CSNK1E-215ENST00000612795 TSPY2A6NKD2 308 aa20.36■□□□□ 0.85
CSNK1E-215ENST00000612795 PPP2R5BQ15173 497 aa20.36■□□□□ 0.85
CSNK1E-215ENST00000612795 TSHZ3Q63HK5 1081 aa20.36■□□□□ 0.85
CSNK1E-215ENST00000612795 LOC102724159A0A0B4J2E5 919 aa20.35■□□□□ 0.85
CSNK1E-215ENST00000612795 GPR37L1O60883 481 aa20.35■□□□□ 0.85
CSNK1E-215ENST00000612795 CHMP4BP1P59074 171 aa20.35■□□□□ 0.85
CSNK1E-215ENST00000612795 PWP2Q15269 919 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-215ENST00000612795 CCDC155Q8N6L0 562 aa20.35■□□□□ 0.85
CSNK1E-215ENST00000612795 MPHOSPH6Q99547 160 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-215ENST00000612795 RBM47A0AV96 593 aaKnown RBP20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 NFIBO00712 420 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 NKRFO15226 690 aaKnown RBP eCLIP20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 KPNA6O60684 536 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 CALML3P27482 149 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 PTPN11Q06124 597 aaPredicted RBP20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 PDE4DQ08499 809 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 SPRED2Q7Z698 418 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 GDPD5Q8WTR4 605 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 KHSRPQ92945 711 aaKnown RBP eCLIP20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 ZBED2Q9BTP6 218 aa20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 RANBP17Q9H2T7 1088 aaKnown RBP20.34■□□□□ 0.85
CSNK1E-215ENST00000612795 MUC6Q6W4X9 2439 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms