RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
SSBP4-214ENST00000607020 PITPNM1O00562 1244 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 GPR37L1O60883 481 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 MCCP23508 829 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 TFAP4Q01664 338 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 PDE4BQ07343 736 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
SSBP4-214ENST00000607020 DDX49Q9Y6V7 483 aaKnown RBP17.79■□□□□ 0.44
SSBP4-214ENST00000607020 KIF28PB7ZC32 967 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 APPP05067 770 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 CPT1AP50416 773 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-214ENST00000607020 NFRKBQ6P4R8 1299 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 DEFB128Q7Z7B8 93 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 HERC6Q8IVU3 1022 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 MTG1Q9BT17 334 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-214ENST00000607020 WDR11Q9BZH6 1224 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 LMCD1Q9NZU5 365 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 ADD3Q9UEY8 706 aaKnown RBP17.78■□□□□ 0.44
SSBP4-214ENST00000607020 PRR12Q9ULL5 1215 aa17.78■□□□□ 0.44
SSBP4-214ENST00000607020 TRANK1O15050 2925 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 KPNA6O60684 536 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 ICAM1P05362 532 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 SLC3A2P08195 630 aaKnown RBP17.77■□□□□ 0.44
SSBP4-214ENST00000607020 NOVP48745 357 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 IKQ13123 557 aaPredicted RBP17.77■□□□□ 0.44
SSBP4-214ENST00000607020 RETREG2Q8NC44 543 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 CERS4Q9HA82 394 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 PIEZO1Q92508 2521 aa17.77■□□□□ 0.44
SSBP4-214ENST00000607020 PRRC2BQ5JSZ5 2229 aaKnown RBP17.76■□□□□ 0.43
SSBP4-214ENST00000607020 MYH8P13535 1937 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 NKRFO15226 690 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■□□□□ 10.9
SSBP4-214ENST00000607020 LPXNO60711 386 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 ARHGEF15O94989 841 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 NBPF20Q3BBV1 942 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 KRT40Q6A162 431 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 NSMFQ6X4W1 530 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 ARNTL2Q8WYA1 636 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
SSBP4-214ENST00000607020 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-214ENST00000607020 CCPG1Q9ULG6 757 aa17.76■□□□□ 0.43
SSBP4-214ENST00000607020 A6NJR5 290 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 M0R2C6 588 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-214ENST00000607020 GRB10Q13322 594 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 BFSP2Q13515 415 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-214ENST00000607020 LRRFIP1Q32MZ4 808 aaKnown RBP17.75■□□□□ 0.43
SSBP4-214ENST00000607020 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-214ENST00000607020 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 KCTD1Q719H9 257 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 RANBP17Q9H2T7 1088 aaKnown RBP17.75■□□□□ 0.43
SSBP4-214ENST00000607020 C11orf16Q9NQ32 467 aa17.75■□□□□ 0.43
SSBP4-214ENST00000607020 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
SSBP4-214ENST00000607020 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-214ENST00000607020 MYL3P08590 195 aa17.74■□□□□ 0.43
SSBP4-214ENST00000607020 SNAP25P60880 206 aa17.74■□□□□ 0.43
SSBP4-214ENST00000607020 PPARAQ07869 468 aa17.74■□□□□ 0.43
SSBP4-214ENST00000607020 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
SSBP4-214ENST00000607020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■□□ 16.2
SSBP4-214ENST00000607020 REV3LO60673 3130 aa17.74■□□□□ 0.43
SSBP4-214ENST00000607020 EDNRBP24530 442 aa17.73■□□□□ 0.43
SSBP4-214ENST00000607020 OR6J1Q8NGC5 347 aa17.73■□□□□ 0.43
SSBP4-214ENST00000607020 KHSRPQ92945 711 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSBP4-214ENST00000607020 GPATCH3Q96I76 525 aa17.73■□□□□ 0.43
SSBP4-214ENST00000607020 FTOQ9C0B1 505 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSBP4-214ENST00000607020 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
SSBP4-214ENST00000607020 STX8Q9UNK0 236 aa17.73■□□□□ 0.43
SSBP4-214ENST00000607020 RAD50Q92878 1312 aa17.72■□□□□ 0.43
SSBP4-214ENST00000607020 MCM3APO60318 1980 aa17.72■□□□□ 0.43
SSBP4-214ENST00000607020 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
SSBP4-214ENST00000607020 NAPBQ9H115 298 aa17.72■□□□□ 0.43
SSBP4-214ENST00000607020 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.43
SSBP4-214ENST00000607020 GPNMBQ14956 572 aa17.71■□□□□ 0.43
SSBP4-214ENST00000607020 FAM47CQ5HY64 1035 aa17.71■□□□□ 0.43
SSBP4-214ENST00000607020 SESTD1Q86VW0 696 aa17.71■□□□□ 0.43
SSBP4-214ENST00000607020 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
SSBP4-214ENST00000607020 SCFD2Q8WU76 684 aa17.71■□□□□ 0.43
SSBP4-214ENST00000607020 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
SSBP4-214ENST00000607020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-214ENST00000607020 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 NFIBO00712 420 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 RBL2Q08999 1139 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 DNERQ8NFT8 737 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
SSBP4-214ENST00000607020 DCTPP1Q9H773 170 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 CD320Q9NPF0 282 aa17.7■□□□□ 0.42
SSBP4-214ENST00000607020 NMT2O60551 498 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 FGRP09769 529 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 KCNJ6P48051 423 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 WDR5P61964 334 aaKnown RBP17.69■□□□□ 0.42
SSBP4-214ENST00000607020 ZMYM1Q5SVZ6 1142 aa17.69■□□□□ 0.42
SSBP4-214ENST00000607020 SYDE2Q5VT97 1194 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms