RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 CNNM4Q6P4Q7 775 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 BBXQ8WY36 941 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 NUP58Q9BVL2 599 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 MLXIPQ9HAP2 919 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 MYH6P13533 1939 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 SLIT2O94813 1529 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 BUB1O43683 1085 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 RNF40O75150 1001 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 MOCS3O95396 460 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 FGRP09769 529 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 ZBED6P86452 979 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 SLC7A5Q01650 507 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 CALCRLQ16602 461 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 CCDC40Q4G0X9 1142 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 SBK1Q52WX2 424 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 HNRNPLLQ8WVV9 542 aaKnown RBP17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 SMARCAL1Q9NZC9 954 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 RAB21Q9UL25 225 aa17.63■□□□□ 0.41
ARHGEF1-219ENST00000599846 POTEMA6NI47 508 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 RFC4P35249 363 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 PPARDQ03181 441 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 GJA10Q969M2 543 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 RUFY1Q96T51 708 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 KANSL2Q9H9L4 492 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 KBTBD4Q9NVX7 518 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 KLRC4O43908 158 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 SRGNP10124 158 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 GSTO1P78417 241 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 SNX29Q8TEQ0 813 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 DUSP9Q99956 384 aaKnown RBP17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 CCSER1Q9C0I3 900 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 SH3GLB2Q9NR46 395 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 LRP6O75581 1613 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 NKRFO15226 690 aaKnown RBP eCLIP17.62■□□□□ 0.413e-7■□□□□ 10.1
ARHGEF1-219ENST00000599846 KRT18P05783 430 aaKnown RBP17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 EPS15P42566 896 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 USP14P54578 494 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 KCNB1Q14721 858 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 CLEC10AQ8IUN9 316 aa17.62■□□□□ 0.41
ARHGEF1-219ENST00000599846 PDS5AQ29RF7 1337 aaKnown RBP17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 A0A1W2PQC6 194 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 FAM170AA1A519 330 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 TRIM66O15016 1216 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 CDK8P49336 464 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 SND1Q7KZF4 910 aaKnown RBP eCLIP17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 NELFCDQ8IXH7 590 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 DNAJC7Q99615 494 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 SPATA31A1Q5TZJ5 1347 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 TRAF5O00463 557 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 UFL1O94874 794 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 TUBBP07437 444 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 MCM3P25205 808 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 EIF4A3P38919 411 aaKnown RBP17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 MAGEA1P43355 309 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 IQCEQ6IPM2 695 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 TRAPPC11Q7Z392 1133 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 ZNF804AQ7Z570 1209 aa17.61■□□□□ 0.41
ARHGEF1-219ENST00000599846 USP17L5A8MUK1 530 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 CCDC155Q8N6L0 562 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 CEP95Q96GE4 821 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 PAFAH1B1P43034 410 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 SLC35G1Q2M3R5 365 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 FAM71BQ8TC56 605 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 LRRC15Q8TF66 581 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 CHD4Q14839 1912 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 PSMD14O00487 310 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 RASA1P20936 1047 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 AMPD2Q01433 879 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 PTPROQ16827 1216 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 ZNF507Q8TCN5 953 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 AFAP1L1Q8TED9 768 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 ALS2CR12Q96Q35 445 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 NDST4Q9H3R1 872 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 EHD2Q9NZN4 543 aa17.6■□□□□ 0.41
ARHGEF1-219ENST00000599846 TDP2O95551 362 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 RASSF7Q02833 373 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 NCK2O43639 380 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 TTC19Q6DKK2 380 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 NGLY1Q96IV0 654 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 TSG101Q99816 390 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 UBXN6Q9BZV1 441 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 CCNL1Q9UK58 526 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 MFSD14BQ5SR56 506 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 GALNT17Q6IS24 598 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 FOXR1Q6PIV2 292 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 BMP2KQ9NSY1 1161 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 LCMT1Q9UIC8 334 aa17.59■□□□□ 0.41
ARHGEF1-219ENST00000599846 LAD1O00515 517 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms