RNA–Protein interactions for RNA: ENST00000598364.1

SYMPK-211, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-211ENST00000598364 MYH7P12883 1935 aa17.47■□□□□ 0.39
SYMPK-211ENST00000598364 COL4A4P53420 1690 aaPredicted RBP17.46■□□□□ 0.39
SYMPK-211ENST00000598364 PLIN4Q96Q06 1357 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.46■□□□□ 0.39
SYMPK-211ENST00000598364 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 ALAS1P13196 640 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 GPNMBQ14956 572 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 NBPF20Q3BBV1 942 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 ZSCAN25Q6NSZ9 544 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 ZNF444Q8N0Y2 327 aaPredicted RBP17.46■□□□□ 0.39
SYMPK-211ENST00000598364 OSBP2Q969R2 916 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 POLR3EQ9NVU0 708 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 PTPRSQ13332 1948 aa17.46■□□□□ 0.39
SYMPK-211ENST00000598364 RBM47A0AV96 593 aaKnown RBP17.45■□□□□ 0.38
SYMPK-211ENST00000598364 PRR33A8MZF0 331 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 PLA2G6O60733 806 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 TMCO2Q7Z6W1 182 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-211ENST00000598364 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 GDPD5Q8WTR4 605 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 GMCL1Q96IK5 515 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 MTG1Q9BT17 334 aaPredicted RBP17.45■□□□□ 0.38
SYMPK-211ENST00000598364 WDR11Q9BZH6 1224 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 SCN10AQ9Y5Y9 1956 aa17.45■□□□□ 0.38
SYMPK-211ENST00000598364 RBAK-RBAKDNI3L0D1 243 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 MYL3P08590 195 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 FAM178BQ8IXR5 827 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
SYMPK-211ENST00000598364 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 CTAGE1Q96RT6 745 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 FTOQ9C0B1 505 aaKnown RBP eCLIP17.44■□□□□ 0.38
SYMPK-211ENST00000598364 UBE2ZQ9H832 354 aaPredicted RBP17.44■□□□□ 0.38
SYMPK-211ENST00000598364 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
SYMPK-211ENST00000598364 BAIAP3O94812 1187 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 MCCP23508 829 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 CPT1AP50416 773 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 WDR5P61964 334 aaKnown RBP17.43■□□□□ 0.38
SYMPK-211ENST00000598364 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 NFRKBQ6P4R8 1299 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 KCTD1Q719H9 257 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 GJD3Q8N144 294 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 SUGCTQ9HAC7 445 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 PRR12Q9ULL5 1215 aa17.43■□□□□ 0.38
SYMPK-211ENST00000598364 SLC1A4P43007 532 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 MRE11P49959 708 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 ALDH5A1P51649 535 aaPredicted RBP17.42■□□□□ 0.38
SYMPK-211ENST00000598364 TCTN1Q2MV58 587 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 LEXMQ3ZCV2 418 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 NSMFQ6X4W1 530 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 RETREG2Q8NC44 543 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 OR6J1Q8NGC5 347 aa17.42■□□□□ 0.38
SYMPK-211ENST00000598364 A6NJR5 290 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 GPAA1O43292 621 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 IL9P15248 144 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 DEFB103AP81534 67 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 TFAP4Q01664 338 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
SYMPK-211ENST00000598364 BAATQ14032 418 aaPredicted RBP17.41■□□□□ 0.38
SYMPK-211ENST00000598364 APPBP2Q92624 585 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
SYMPK-211ENST00000598364 ISY1Q9ULR0 285 aaKnown RBP17.41■□□□□ 0.38
SYMPK-211ENST00000598364 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 M0R2C6 588 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 TDO2P48775 406 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 ERVK-21P61565 698 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
SYMPK-211ENST00000598364 BFSP2Q13515 415 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 RCSD1Q6JBY9 416 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 COPS5Q92905 334 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 GPHNQ9NQX3 736 aaPredicted RBP17.4■□□□□ 0.38
SYMPK-211ENST00000598364 ZBTB40Q9NUA8 1239 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 CCPG1Q9ULG6 757 aa17.4■□□□□ 0.38
SYMPK-211ENST00000598364 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 NFIBO00712 420 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 HMMRO75330 724 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 ICAM1P05362 532 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 KCNJ6P48051 423 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 NHLH1Q02575 133 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
SYMPK-211ENST00000598364 RANBP17Q9H2T7 1088 aaKnown RBP17.39■□□□□ 0.37
SYMPK-211ENST00000598364 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 ADD3Q9UEY8 706 aaKnown RBP17.39■□□□□ 0.37
SYMPK-211ENST00000598364 MTUS1Q9ULD2 1270 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 USP34Q70CQ2 3546 aa17.39■□□□□ 0.37
SYMPK-211ENST00000598364 LINC01553A4QN01 128 aa17.38■□□□□ 0.37
SYMPK-211ENST00000598364 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
SYMPK-211ENST00000598364 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
SYMPK-211ENST00000598364 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
SYMPK-211ENST00000598364 GJB5O95377 273 aa17.38■□□□□ 0.37
SYMPK-211ENST00000598364 CXCL10P02778 98 aa17.38■□□□□ 0.37
SYMPK-211ENST00000598364 KCNA5P22460 613 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms