RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 KCNA10Q16322 511 aa17.35■□□□□ 0.37
SF3A2-207ENST00000592839 QRICH1Q2TAL8 776 aa17.35■□□□□ 0.37
SF3A2-207ENST00000592839 DUSP28Q4G0W2 176 aa17.35■□□□□ 0.37
SF3A2-207ENST00000592839 IGDCC4Q8TDY8 1250 aa17.35■□□□□ 0.37
SF3A2-207ENST00000592839 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
SF3A2-207ENST00000592839 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
SF3A2-207ENST00000592839 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.34■□□□□ 0.37
SF3A2-207ENST00000592839 ASGR1P07306 291 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 SMPD1P17405 629 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 TLE2Q04725 743 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 NECTIN1Q15223 517 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 CHMP4CQ96CF2 233 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 GLT1D1Q96MS3 346 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 MPHOSPH6Q99547 160 aaKnown RBP17.34■□□□□ 0.37
SF3A2-207ENST00000592839 UBE2OQ9C0C9 1292 aaKnown RBP17.34■□□□□ 0.37
SF3A2-207ENST00000592839 UBA5Q9GZZ9 404 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 STARD7Q9NQZ5 370 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 ATP11BQ9Y2G3 1177 aa17.34■□□□□ 0.37
SF3A2-207ENST00000592839 KLRF2D3W0D1 207 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 OPLAHO14841 1288 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 NKRFO15226 690 aaKnown RBP eCLIP17.33■□□□□ 0.36
SF3A2-207ENST00000592839 CLTBP09497 229 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 C6orf222P0C671 652 aaPredicted RBP17.33■□□□□ 0.36
SF3A2-207ENST00000592839 SART3Q15020 963 aaKnown RBP17.33■□□□□ 0.36
SF3A2-207ENST00000592839 SLC35G1Q2M3R5 365 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 RALYLQ86SE5 291 aaKnown RBP17.33■□□□□ 0.36
SF3A2-207ENST00000592839 TLK2Q86UE8 772 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 MCF2L2Q86YR7 1114 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 FBXO16Q8IX29 292 aaPredicted RBP17.33■□□□□ 0.36
SF3A2-207ENST00000592839 STAG2Q8N3U4 1231 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 PURBQ96QR8 312 aaKnown RBP17.33■□□□□ 0.36
SF3A2-207ENST00000592839 CPVLQ9H3G5 476 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 TBX21Q9UL17 535 aa17.33■□□□□ 0.36
SF3A2-207ENST00000592839 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 B4DLN1 442 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 ZBTB5O15062 677 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 HSD17B4P51659 736 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 MRPL12P52815 198 aaKnown RBP17.32■□□□□ 0.36
SF3A2-207ENST00000592839 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 TRAF1Q13077 416 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 TSGA10IPQ3SY00 556 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 SYTL5Q8TDW5 730 aaPredicted RBP17.32■□□□□ 0.36
SF3A2-207ENST00000592839 TRIM43Q96BQ3 446 aaPredicted RBP17.32■□□□□ 0.36
SF3A2-207ENST00000592839 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 AMNQ9BXJ7 453 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
SF3A2-207ENST00000592839 COL6A3P12111 3177 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 CUL9Q8IWT3 2517 aa17.32■□□□□ 0.36
SF3A2-207ENST00000592839 A0A0U1RQG5 324 aaPredicted RBP17.31■□□□□ 0.36
SF3A2-207ENST00000592839 ERICH2A1L162 156 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 PTPDC1A2A3K4 754 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 ARVCFO00192 962 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 IFIT3O14879 490 aaKnown RBP17.31■□□□□ 0.36
SF3A2-207ENST00000592839 CYTH3O43739 400 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 DDAH1O94760 285 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 CD4P01730 458 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 LIFRP42702 1097 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 WTAPQ15007 396 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 FSCN1Q16658 493 aaKnown RBP17.31■□□□□ 0.36
SF3A2-207ENST00000592839 GNASQ5JWF2 1037 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 FAM126BQ8IXS8 530 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 DEFB123Q8N688 67 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 SCFD2Q8WU76 684 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 LBHD1Q9BQE6 289 aaPredicted RBP17.31■□□□□ 0.36
SF3A2-207ENST00000592839 LY9Q9HBG7 655 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 PDGFCQ9NRA1 345 aa17.31■□□□□ 0.36
SF3A2-207ENST00000592839 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
SF3A2-207ENST00000592839 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-207ENST00000592839 IRX5P78411 483 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-207ENST00000592839 MDM2Q00987 491 aaPredicted RBP17.3■□□□□ 0.36
SF3A2-207ENST00000592839 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
SF3A2-207ENST00000592839 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
SF3A2-207ENST00000592839 SH3RF1Q7Z6J0 888 aa17.3■□□□□ 0.36
SF3A2-207ENST00000592839 TMTC2Q8N394 836 aa17.3■□□□□ 0.36
SF3A2-207ENST00000592839 SENP2Q9HC62 589 aa17.3■□□□□ 0.36
SF3A2-207ENST00000592839 COL20A1Q9P218 1284 aa17.3■□□□□ 0.36
SF3A2-207ENST00000592839 FRMPD4Q14CM0 1322 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 A6NJR5 290 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 SLC27A2O14975 620 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 ITGB8P26012 769 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 CALML3P27482 149 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 USH1GQ495M9 461 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 SGMS1Q86VZ5 419 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 NSUN6Q8TEA1 469 aaKnown RBP17.29■□□□□ 0.36
SF3A2-207ENST00000592839 SPZ1Q9BXG8 430 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 WDR11Q9BZH6 1224 aa17.29■□□□□ 0.36
SF3A2-207ENST00000592839 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
SF3A2-207ENST00000592839 GRIN2DO15399 1336 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 DCDC2CA8MYV0 355 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 DLL1O00548 723 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
SF3A2-207ENST00000592839 ZEB2O60315 1214 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 MCM5P33992 734 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 PDE4DQ08499 809 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms