RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	RNF146	Q9NTX7	359 aa		11.49	□□□□□ -0.57
EIF4A1-231	ENST00000584054	CYP39A1	Q9NYL5	469 aa		11.49	□□□□□ -0.57
EIF4A1-231	ENST00000584054	STK24	Q9Y6E0	443 aa		11.49	□□□□□ -0.57
EIF4A1-231	ENST00000584054	EDIL3	O43854	480 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PDIA4	P13667	645 aa	Known RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	TAL1	P17542	331 aa	Predicted RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	GJB2	P29033	226 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ANP32A	P39687	249 aa	Known RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	AKAP17A	Q02040	695 aa	Known RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	BECN1	Q14457	450 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ZNF792	Q3KQV3	632 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PLEKHH3	Q7Z736	793 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	MCF2L2	Q86YR7	1114 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.48	□□□□□ -0.57	8e-6	■■■□□ 18.6
EIF4A1-231	ENST00000584054	TRIM47	Q96LD4	638 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ALG1	Q9BT22	464 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	CWC22	Q9HCG8	908 aa	Known RBP	11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PLXNB2	O15031	1838 aa		11.48	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ASTN1	O14525	1302 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PFAS	O15067	1338 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	RPTOR	Q8N122	1335 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	SMCO2	A6NFE2	343 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	DTNB	O60941	627 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	FKTN	O75072	461 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	COBL	O75128	1261 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PPFIA3	O75145	1194 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	MMP1	P03956	469 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	HSPA8	P11142	646 aa	Known RBP	11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	XRCC5	P13010	732 aa	Known RBP	11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ALAS1	P13196	640 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	EDNRB	P24530	442 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	GNA11	P29992	359 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	MRPL12	P52815	198 aa	Known RBP	11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	RPS6	P62753	249 aa	Known RBP	11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	IRF5	Q13568	498 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	KRT40	Q6A162	431 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	MCTP2	Q6DN12	878 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	MAMDC4	Q6UXC1	1216 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	HEATR3	Q7Z4Q2	680 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	CCDC148	Q8NFR7	591 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	FAM212A	Q96EL1	285 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	DDX11	Q96FC9	970 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PSTPIP2	Q9H939	334 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	GJB4	Q9NTQ9	266 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	VPS54	Q9P1Q0	977 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	COL20A1	Q9P218	1284 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ISY1	Q9ULR0	285 aa	Known RBP	11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PCDHA4	Q9UN74	947 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	SMC3	Q9UQE7	1217 aa		11.47	□□□□□ -0.57
EIF4A1-231	ENST00000584054	FOXN1	O15353	648 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	CHRM1	P11229	460 aa	Predicted RBP	11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	FCER1A	P12319	257 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	U2AF2	P26368	475 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	3e-13	■■■■□ 19.4
EIF4A1-231	ENST00000584054	CALML3	P27482	149 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	PRMT2	P55345	433 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	BAAT	Q14032	418 aa	Predicted RBP	11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	USH1G	Q495M9	461 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	NCAPG2	Q86XI2	1143 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	MSL3	Q8N5Y2	521 aa	Known RBP	11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	DNER	Q8NFT8	737 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ERO1A	Q96HE7	468 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	ARHGAP39	Q9C0H5	1083 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	KIF3A	Q9Y496	699 aa		11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.46	□□□□□ -0.57
EIF4A1-231	ENST00000584054	LCT	P09848	1927 aa		11.46	□□□□□ -0.58
EIF4A1-231	ENST00000584054	MYH6	P13533	1939 aa		11.46	□□□□□ -0.58
EIF4A1-231	ENST00000584054	MGAM	O43451	1857 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	SOWAHB	A6NEL2	793 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	FOS	P01100	380 aa	Predicted RBP	11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	POLR2M	P0CAP2	368 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	XBP1	P17861	261 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PDC	P20941	246 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	SYT1	P21579	422 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PSMC4	P43686	418 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	NAPA	P54920	295 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	FCGRT	P55899	365 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	MAP2K5	Q13163	448 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	AP3B2	Q13367	1082 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PLS1	Q14651	629 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	RNF207	Q6ZRF8	634 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	BLID	Q8IZY5	108 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	BICD2	Q8TD16	824 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	SOCS4	Q8WXH5	440 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PIBF1	Q8WXW3	757 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	CUL5	Q93034	780 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	C8orf76	Q96K31	380 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	MMP19	Q99542	508 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	BEGAIN	Q9BUH8	593 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	FOXP1	Q9H334	677 aa	Predicted RBP	11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	C6orf50	Q9HD87	102 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	SRRD	Q9UH36	339 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PCDHA6	Q9UN73	950 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	KCNJ14	Q9UNX9	436 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	PCDHA8	Q9Y5H6	950 aa		11.45	□□□□□ -0.58
EIF4A1-231	ENST00000584054	DOCK3	Q8IZD9	2030 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms