RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 KRT2P35908 639 aa13.2□□□□□ -0.3
GGA3-211ENST00000582232 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
GGA3-211ENST00000582232 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
GGA3-211ENST00000582232 TNFRSF25Q93038 417 aa13.2□□□□□ -0.3
GGA3-211ENST00000582232 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
GGA3-211ENST00000582232 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
GGA3-211ENST00000582232 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
GGA3-211ENST00000582232 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
GGA3-211ENST00000582232 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
GGA3-211ENST00000582232 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
GGA3-211ENST00000582232 LCTP09848 1927 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 CFBP00751 764 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 FOSP01100 380 aaPredicted RBP13.19□□□□□ -0.3
GGA3-211ENST00000582232 FCER1AP12319 257 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
GGA3-211ENST00000582232 NUCB2P80303 420 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 AP3B2Q13367 1082 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
GGA3-211ENST00000582232 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
GGA3-211ENST00000582232 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 GPR25O00155 361 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 BRD1O95696 1058 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 PTPREP23469 700 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 FOSBP53539 338 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
GGA3-211ENST00000582232 SP3Q02447 781 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
GGA3-211ENST00000582232 GRB14Q14449 540 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 KCTD2Q14681 263 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
GGA3-211ENST00000582232 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 OXER1Q8TDS5 423 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 SYTL5Q8TDW5 730 aaPredicted RBP13.18□□□□□ -0.3
GGA3-211ENST00000582232 BEGAINQ9BUH8 593 aa13.18□□□□□ -0.3
GGA3-211ENST00000582232 FRMPD4Q14CM0 1322 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 PLXNA1Q9UIW2 1896 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 VPS37CA5D8V6 355 aaPredicted RBP13.17□□□□□ -0.3
GGA3-211ENST00000582232 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 ZSCAN22P10073 491 aaPredicted RBP13.17□□□□□ -0.3
GGA3-211ENST00000582232 NR5A1Q13285 461 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 PKP1Q13835 747 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 UBE2SQ16763 222 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 BRAPQ7Z569 592 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 NOSTRINQ8IVI9 506 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 FAM133AQ8N9E0 248 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 MMP19Q99542 508 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
GGA3-211ENST00000582232 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
GGA3-211ENST00000582232 ZDHHC9Q9Y397 364 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
GGA3-211ENST00000582232 LOC102724159A0A0B4J2E5 919 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 SPDYE3A6NKU9 549 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
GGA3-211ENST00000582232 FCGRTP55899 365 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 RESTQ13127 1097 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 PWP2Q15269 919 aaKnown RBP13.16□□□□□ -0.3
GGA3-211ENST00000582232 MORN1Q5T089 497 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
GGA3-211ENST00000582232 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 USP6NLQ92738 828 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 CHMP5Q9NZZ3 219 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 COL20A1Q9P218 1284 aa13.16□□□□□ -0.3
GGA3-211ENST00000582232 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
GGA3-211ENST00000582232 RPTORQ8N122 1335 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 MYH15Q9Y2K3 1946 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 FKTNO75072 461 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 F13A1P00488 732 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 GNRH1P01148 92 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 HOXC6P09630 235 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 ADORA2AP29274 412 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 CTGFP29279 349 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 SREBF1P36956 1147 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
GGA3-211ENST00000582232 KIF22Q14807 665 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 NONOQ15233 471 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGA3-211ENST00000582232 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 TRIM47Q96LD4 638 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 TAAR1Q96RJ0 339 aa13.15□□□□□ -0.3
GGA3-211ENST00000582232 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms