RNA–Protein interactions for RNA: ENST00000581898.5

CUEDC1-210, Transcript of CUE domain containing 1, humanhuman

TSL 5

Gene CUEDC1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-210ENST00000581898 CPT1AP50416 773 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 TTLL4Q14679 1199 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 KCTD1Q719H9 257 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 FBXO16Q8IX29 292 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 MORC4Q8TE76 937 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 WDR11Q9BZH6 1224 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 NAPBQ9H115 298 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 TRMT13Q9NUP7 481 aaKnown RBP11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 CCPG1Q9ULG6 757 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 STX8Q9UNK0 236 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 ARIH1Q9Y4X5 557 aaPredicted RBP11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 CHD7Q9P2D1 2997 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 XIRP2A4UGR9 3374 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 TNKSO95271 1327 aa11.83□□□□□ -0.52
CUEDC1-210ENST00000581898 PLIN4Q96Q06 1357 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 TSPY2A6NKD2 308 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 RFXAPO00287 272 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 KPNA6O60684 536 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 ICAM1P05362 532 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 CA3P07451 260 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 MYL3P08590 195 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 PTGS1P23219 599 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 KCNQ1P51787 676 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 SNAP25P60880 206 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 PURAQ00577 322 aaKnown RBP11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 PPARAQ07869 468 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 DDX49Q9Y6V7 483 aaKnown RBP11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 GREB1LQ9C091 1923 aaPredicted RBP11.82□□□□□ -0.52
CUEDC1-210ENST00000581898 RBM47A0AV96 593 aaKnown RBP11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 M0R2C6 588 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 BAATQ14032 418 aaPredicted RBP11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 NBPF20Q3BBV1 942 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 FAM47CQ5HY64 1035 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 HLA-CQ95604 372 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 CERS4Q9HA82 394 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
CUEDC1-210ENST00000581898 MCM3APO60318 1980 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 B4DLN1 442 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 NKRFO15226 690 aaKnown RBP eCLIP11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 TLL1O43897 1013 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 IQCF3P0C7M6 154 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 BFSP2Q13515 415 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 ARNTL2Q8WYA1 636 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 PURBQ96QR8 312 aaKnown RBP11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 IL17RBQ9NRM6 502 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 RAD50Q92878 1312 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 TRANK1O15050 2925 aa11.8□□□□□ -0.52
CUEDC1-210ENST00000581898 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 A6NJR5 290 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 TAP1Q03518 808 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 PDE4DQ08499 809 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 DCAF4Q8WV16 495 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 LRFN3Q9BTN0 628 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 EPHX3Q9H6B9 360 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
CUEDC1-210ENST00000581898 NMT2O60551 498 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 BAIAP3O94812 1187 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 SLC16A2P36021 539 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 TMEM31Q5JXX7 168 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 RNF207Q6ZRF8 634 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 SCFD2Q8WU76 684 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 INCENPQ9NQS7 918 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 LMCD1Q9NZU5 365 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 TTC41PQ6P2S7 1318 aa11.78□□□□□ -0.52
CUEDC1-210ENST00000581898 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms