RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 HSD17B4P51659 736 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 RPS6P62753 249 aaKnown RBP18.38■□□□□ 0.53
CCDC57-213ENST00000581625 HMGN5P82970 282 aaKnown RBP18.38■□□□□ 0.53
CCDC57-213ENST00000581625 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 SLC30A10Q6XR72 485 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 ZNF467Q7Z7K2 595 aaPredicted RBP18.38■□□□□ 0.53
CCDC57-213ENST00000581625 SNX21Q969T3 373 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 GLT8D2Q9H1C3 349 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 SH3GLB2Q9NR46 395 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 PTCH2Q9Y6C5 1203 aa18.38■□□□□ 0.53
CCDC57-213ENST00000581625 LOC102724159A0A0B4J2E5 919 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 ESYT2A0FGR8 921 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 COBLO75128 1261 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 CFBP00751 764 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 PGK2P07205 417 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 XBP1P17861 261 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 BAATQ14032 418 aaPredicted RBP18.37■□□□□ 0.53
CCDC57-213ENST00000581625 PWP2Q15269 919 aaKnown RBP18.37■□□□□ 0.53
CCDC57-213ENST00000581625 OLFML2BQ68BL8 750 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
CCDC57-213ENST00000581625 FAM133AQ8N9E0 248 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 DNERQ8NFT8 737 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 CUL5Q93034 780 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
CCDC57-213ENST00000581625 ORC3Q9UBD5 711 aaPredicted RBP18.37■□□□□ 0.53
CCDC57-213ENST00000581625 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
CCDC57-213ENST00000581625 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-213ENST00000581625 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-213ENST00000581625 PIK3CDO00329 1044 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 ADCY3O60266 1144 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 PPFIA3O75145 1194 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 POLR2MP0CAP2 368 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 CALML3P27482 149 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 GRK4P32298 578 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 HSCBQ8IWL3 235 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 MPHOSPH6Q99547 160 aaKnown RBP18.36■□□□□ 0.53
CCDC57-213ENST00000581625 PSTPIP2Q9H939 334 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 HTTP42858 3142 aa18.36■□□□□ 0.53
CCDC57-213ENST00000581625 HMGCRP04035 888 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 ADCY7P51828 1080 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 MRPL12P52815 198 aaKnown RBP18.35■□□□□ 0.53
CCDC57-213ENST00000581625 SLC9C1Q4G0N8 1177 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 TYW1BQ6NUM6 668 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 NPLOC4Q8TAT6 608 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 SYTL5Q8TDW5 730 aaPredicted RBP18.35■□□□□ 0.53
CCDC57-213ENST00000581625 TRIB2Q92519 343 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 ZMYND12Q9H0C1 365 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 RIC8AQ9NPQ8 531 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 KIF3AQ9Y496 699 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
CCDC57-213ENST00000581625 SMCHD1A6NHR9 2005 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 DOCK3Q8IZD9 2030 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 PLXNA1Q9UIW2 1896 aa18.35■□□□□ 0.53
CCDC57-213ENST00000581625 SYNGAP1Q96PV0 1343 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 B4DLN1 442 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 JAK2O60674 1132 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 GNA11P29992 359 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 MCTP2Q6DN12 878 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 C6orf50Q9HD87 102 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 VPS54Q9P1Q0 977 aa18.34■□□□□ 0.53
CCDC57-213ENST00000581625 LCTP09848 1927 aa18.33■□□□□ 0.53
CCDC57-213ENST00000581625 SMCO2A6NFE2 343 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 ASB14A6NK59 587 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.52
CCDC57-213ENST00000581625 ALDH5A1P51649 535 aaPredicted RBP18.33■□□□□ 0.52
CCDC57-213ENST00000581625 CNTN2Q02246 1040 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 CUL4AQ13619 759 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 MFSD14CQ5VZR4 134 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 GALNT17Q6IS24 598 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 MAMDC4Q6UXC1 1216 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 BICD2Q8TD16 824 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 FGD4Q96M96 766 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 MCOLN1Q9GZU1 580 aa18.33■□□□□ 0.52
CCDC57-213ENST00000581625 ZNFX1Q9P2E3 1918 aaKnown RBP18.32■□□□□ 0.52
CCDC57-213ENST00000581625 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 MEIS2O14770 477 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 IGHA2P01877 340 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 ELNP15502 786 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 HOXA13P31271 388 aaPredicted RBP18.32■□□□□ 0.52
CCDC57-213ENST00000581625 AP3B2Q13367 1082 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 CCL14Q16627 93 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 FAM184AQ8NB25 1140 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
CCDC57-213ENST00000581625 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
CCDC57-213ENST00000581625 ASTN1O14525 1302 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 FRMPD4Q14CM0 1322 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 FOSP01100 380 aaPredicted RBP18.31■□□□□ 0.52
CCDC57-213ENST00000581625 NLRP5P59047 1200 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 UBXN2AP68543 259 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 TRIM29Q14134 588 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 REXO1Q8N1G1 1221 aaKnown RBP18.31■□□□□ 0.52
CCDC57-213ENST00000581625 DAGLBQ8NCG7 672 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 AIFM3Q96NN9 605 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms