RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SLC1A4P43007 532 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 KCNJ6P48051 423 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 PDE4BQ07343 736 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 STAG1Q8WVM7 1258 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 CHMP4BQ9H444 224 aaKnown RBP14.18□□□□□ -0.14
CTNS-208ENST00000574218 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 TRMT13Q9NUP7 481 aaKnown RBP14.18□□□□□ -0.14
CTNS-208ENST00000574218 ADD3Q9UEY8 706 aaKnown RBP14.18□□□□□ -0.14
CTNS-208ENST00000574218 NOD1Q9Y239 953 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
CTNS-208ENST00000574218 LRRFIP1Q32MZ4 808 aaKnown RBP14.17□□□□□ -0.14
CTNS-208ENST00000574218 NSMFQ6X4W1 530 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 OR6J1Q8NGC5 347 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 APPBP2Q92624 585 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 CHMP4CQ96CF2 233 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 MPHOSPH6Q99547 160 aaKnown RBP14.17□□□□□ -0.14
CTNS-208ENST00000574218 MTG1Q9BT17 334 aaPredicted RBP14.17□□□□□ -0.14
CTNS-208ENST00000574218 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 CCPG1Q9ULG6 757 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 PTPRSQ13332 1948 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 TET1Q8NFU7 2136 aa14.17□□□□□ -0.14
CTNS-208ENST00000574218 BRWD1Q9NSI6 2320 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 XIRP2A4UGR9 3374 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 TLL1O43897 1013 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 TAP1Q03518 808 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 BFSP2Q13515 415 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 DUSP28Q4G0W2 176 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 TAPT1Q6NXT6 567 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 CYP39A1Q9NYL5 469 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 DDX19BQ9UMR2 479 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 PLIN4Q96Q06 1357 aa14.16□□□□□ -0.14
CTNS-208ENST00000574218 SIP14410 1827 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 GPAA1O43292 621 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 ZFYP08048 801 aaPredicted RBP14.15□□□□□ -0.14
CTNS-208ENST00000574218 PTGS1P23219 599 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 MCCP23508 829 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 TFAP4Q01664 338 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 KRT40Q6A162 431 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 CCDC155Q8N6L0 562 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 STX8Q9UNK0 236 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
CTNS-208ENST00000574218 ZNF536O15090 1300 aa14.15□□□□□ -0.15
CTNS-208ENST00000574218 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 RNF113AO15541 343 aaKnown RBP14.14□□□□□ -0.15
CTNS-208ENST00000574218 KPNA6O60684 536 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 PLA2G6O60733 806 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 GPR37L1O60883 481 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 BAIAP3O94812 1187 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 PURAQ00577 322 aaKnown RBP14.14□□□□□ -0.15
CTNS-208ENST00000574218 HNRNPUQ00839 825 aaKnown RBP eCLIP14.14□□□□□ -0.15
CTNS-208ENST00000574218 GRB10Q13322 594 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 CCDC96Q2M329 555 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 KCTD1Q719H9 257 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 KBTBD3Q8NAB2 608 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 ECHDC1Q9NTX5 307 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
CTNS-208ENST00000574218 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
CTNS-208ENST00000574218 LOC102724159A0A0B4J2E5 919 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 PTPDC1A2A3K4 754 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 FAM86C2PA6NEL3 165 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 EPOPA6NHQ4 379 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
CTNS-208ENST00000574218 NKRFO15226 690 aaKnown RBP eCLIP14.13□□□□□ -0.15
CTNS-208ENST00000574218 IQCF3P0C7M6 154 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 ALDH5A1P51649 535 aaPredicted RBP14.13□□□□□ -0.15
CTNS-208ENST00000574218 CHMP4BP1P59074 171 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 SNAP25P60880 206 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 PPP2R5BQ15173 497 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 PWP2Q15269 919 aaKnown RBP14.13□□□□□ -0.15
CTNS-208ENST00000574218 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 OSBP2Q969R2 916 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 CRBNQ96SW2 442 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 NAPBQ9H115 298 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 EPB41L4AQ9HCS5 686 aaPredicted RBP14.13□□□□□ -0.15
CTNS-208ENST00000574218 LMCD1Q9NZU5 365 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 PRR12Q9ULL5 1215 aa14.13□□□□□ -0.15
CTNS-208ENST00000574218 PIEZO1Q92508 2521 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 TSPY2A6NKD2 308 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 PTPN11Q06124 597 aaPredicted RBP14.12□□□□□ -0.15
CTNS-208ENST00000574218 PDE4DQ08499 809 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 TMEM63BQ5T3F8 832 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 MORC4Q8TE76 937 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 VWCEQ96DN2 955 aa14.12□□□□□ -0.15
CTNS-208ENST00000574218 B4DLN1 442 aa14.11□□□□□ -0.15
CTNS-208ENST00000574218 ICAM1P05362 532 aa14.11□□□□□ -0.15
CTNS-208ENST00000574218 CALML3P27482 149 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms