RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MYADML2A6NDP7 307 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 SOWAHBA6NEL2 793 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 SGSM2O43147 1006 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 ADCY6O43306 1168 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 ACVR2BQ13705 512 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 SLC30A10Q6XR72 485 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 KRT23Q9C075 422 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 ZSWIM5Q9P217 1185 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
RPA1-206ENST00000573994 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 CYP21A2P08686 494 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 PTGS1P23219 599 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 USH1GQ495M9 461 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 CYB5R4Q7L1T6 521 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 RNF180Q86T96 592 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 FBXO16Q8IX29 292 aaPredicted RBP11.69□□□□□ -0.54
RPA1-206ENST00000573994 KATNBL1Q9H079 304 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 PRDM5Q9NQX1 630 aaPredicted RBP11.69□□□□□ -0.54
RPA1-206ENST00000573994 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 PLXNA1Q9UIW2 1896 aa11.69□□□□□ -0.54
RPA1-206ENST00000573994 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.68□□□□□ -0.54
RPA1-206ENST00000573994 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 CALML3P27482 149 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
RPA1-206ENST00000573994 BAATQ14032 418 aaPredicted RBP11.68□□□□□ -0.54
RPA1-206ENST00000573994 DSG2Q14126 1118 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
RPA1-206ENST00000573994 GPATCH4Q5T3I0 446 aaKnown RBP11.68□□□□□ -0.54
RPA1-206ENST00000573994 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
RPA1-206ENST00000573994 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 EEPD1Q7L9B9 569 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 GDF15Q99988 308 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 ABHD16BQ9H3Z7 469 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
RPA1-206ENST00000573994 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 A0A1W2PQ45 241 aaPredicted RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 A0A1W2PQY0 241 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 ASB14A6NK59 587 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 PARP1P09874 1014 aaKnown RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 TRDNQ13061 729 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 ASPRV1Q53RT3 343 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 CHST3Q7LGC8 479 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 CLEC4DQ8WXI8 215 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 UBE2OQ9C0C9 1292 aaKnown RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 SENP2Q9HC62 589 aa11.67□□□□□ -0.54
RPA1-206ENST00000573994 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
RPA1-206ENST00000573994 E7EWF7 191 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 SOX1O00570 391 aaPredicted RBP11.66□□□□□ -0.54
RPA1-206ENST00000573994 PQBP1O60828 265 aaKnown RBP11.66□□□□□ -0.54
RPA1-206ENST00000573994 DUSP11O75319 330 aaKnown RBP11.66□□□□□ -0.54
RPA1-206ENST00000573994 ALDH5A1P51649 535 aaPredicted RBP11.66□□□□□ -0.54
RPA1-206ENST00000573994 ACLYP53396 1101 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 BEX3Q00994 111 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 SNX17Q15036 470 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 SEC23AQ15436 765 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 RNF207Q6ZRF8 634 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 VAT1LQ9HCJ6 419 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 PDGFCQ9NRA1 345 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 PRKAG2Q9UGJ0 569 aa11.66□□□□□ -0.54
RPA1-206ENST00000573994 ZNFX1Q9P2E3 1918 aaKnown RBP11.66□□□□□ -0.54
RPA1-206ENST00000573994 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
RPA1-206ENST00000573994 ANTXR2P58335 489 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 RPS6P62753 249 aaKnown RBP11.65□□□□□ -0.54
RPA1-206ENST00000573994 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 TLE2Q04725 743 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 KCNA10Q16322 511 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 QRICH1Q2TAL8 776 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 TMEM63BQ5T3F8 832 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 SH3RF1Q7Z6J0 888 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 TLK2Q86UE8 772 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
RPA1-206ENST00000573994 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 ESYT1Q9BSJ8 1104 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
RPA1-206ENST00000573994 UPF3AQ9H1J1 476 aaKnown RBP11.65□□□□□ -0.54
RPA1-206ENST00000573994 JMJD4Q9H9V9 463 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 SPC25Q9HBM1 224 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 STARD7Q9NQZ5 370 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.54
RPA1-206ENST00000573994 LCTP09848 1927 aa11.64□□□□□ -0.55
RPA1-206ENST00000573994 A0A1W2PPC1 479 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms