RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 TMED1Q13445 227 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 NECTIN1Q15223 517 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 RBBP5Q15291 538 aaKnown RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 TTC31Q49AM3 519 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 SPECC1Q5M775 1068 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 VPS37DQ86XT2 251 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 DSCC1Q9BVC3 393 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 C2orf49Q9BVC5 232 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 CCDC68Q9H2F9 335 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF304Q9HCX3 659 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 MAP3K12Q12852 859 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 BIRC3Q13489 604 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 SLC4A8Q2Y0W8 1093 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 Q3C1V9 767 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 VPS53Q5VIR6 699 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 CHPFQ8IZ52 775 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 CCDC89Q8N998 374 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF384Q8TF68 577 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 OSBP2Q969R2 916 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 ZSCAN31Q96LW9 406 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 UPF3BQ9BZI7 483 aaKnown RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 PTPRHQ9HD43 1115 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 EVLQ9UI08 416 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 LIMCH1Q9UPQ0 1083 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 C21orf2O43822 256 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 PSMA5P28066 241 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 MATR3P43243 847 aaKnown RBP eCLIP10□□□□□ -0.81
TVP23A-205ENST00000572428 DEUP1Q05D60 604 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 KLHL40Q2TBA0 621 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 C10orf76Q5T2E6 689 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 C16orf54Q6UWD8 224 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 GIMAP8Q8ND71 665 aaPredicted RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 RNPC3Q96LT9 517 aaKnown RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 BAZ2AQ9UIF9 1905 aaKnown RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 TMEM238LA0A1B0GVL6 79 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 RASA4BC9J798 803 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 M0R2C6 588 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 FOXP2O15409 715 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 AKR1B10O60218 316 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 CHGBP05060 677 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 CCDC159P0C7I6 412 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 SCG2P13521 617 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 DALRD3Q5D0E6 543 aaKnown RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 PARD3BQ8TEW8 1205 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 NSUN4Q96CB9 384 aaKnown RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 ZC3H12CQ9C0D7 883 aaKnown RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
TVP23A-205ENST00000572428 XPO7Q9UIA9 1087 aaKnown RBP10□□□□□ -0.81
TVP23A-205ENST00000572428 MYH1P12882 1939 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 HALP42357 657 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 PTH1RQ03431 593 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 NFX1Q12986 1120 aaKnown RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 SLC9C2Q5TAH2 1124 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 SPATA21Q7Z572 469 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 RASEFQ8IZ41 740 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 PCMTD1Q96MG8 357 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 GPR101Q96P66 508 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 TCHPQ9BT92 498 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 MMADHCQ9H3L0 296 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 CYP46A1Q9Y6A2 500 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF532Q9HCE3 1301 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 MRIQ9BWK5 157 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 FAM126AQ9BYI3 521 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 PUS7LQ9H0K6 701 aaKnown RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 SH2B1Q9NRF2 756 aaPredicted RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 SPATS2LQ9NUQ6 558 aaKnown RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 POLG2Q9UHN1 485 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 RBM8AQ9Y5S9 174 aaKnown RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 ATP6V1G1O75348 118 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 RPL17P18621 184 aaKnown RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 LDLRAD1Q5T700 205 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 LEKR1Q6ZMV7 388 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 HOOK3Q86VS8 718 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 PAF1Q8N7H5 531 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 SEC62Q99442 399 aaKnown RBP9.99□□□□□ -0.81
TVP23A-205ENST00000572428 ZDHHC9Q9Y397 364 aa9.99□□□□□ -0.81
TVP23A-205ENST00000572428 LILRB3O75022 631 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 E2F6O75461 281 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
TVP23A-205ENST00000572428 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
TVP23A-205ENST00000572428 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 ALX1Q15699 326 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 GNPTABQ3T906 1256 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 CREB3L3Q68CJ9 461 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 CCDC80Q76M96 950 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 PRIMPOLQ96LW4 560 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 GTF3C4Q9UKN8 822 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 TNFRSF10BO14763 440 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 SMC2O95347 1197 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 MYCP01106 439 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms