RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	HYAL1	Q12794	435 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	TCTN1	Q2MV58	587 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	EPC2	Q52LR7	807 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	NAA16	Q6N069	864 aa	Predicted RBP	7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	TLK2	Q86UE8	772 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	WWC1	Q8IX03	1113 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	PLPP6	Q8IY26	295 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	CCDC144CP	Q8IYA2	1237 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	SPICE1	Q8N0Z3	855 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	TMEM105	Q8N8V8	129 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	RIPOR3	Q96MK2	946 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	SAMD11	Q96NU1	681 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	AP5M1	Q9H0R1	490 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	FBXO28	Q9NVF7	368 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	LRP2BP	Q9P2M1	347 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	RALY	Q9UKM9	306 aa	Known RBP	7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	TMX2	Q9Y320	296 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	RIPK3	Q9Y572	518 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	INSL6	Q9Y581	213 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	PLXNA3	P51805	1871 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	SIPA1L1	O43166	1804 aa		7.61	□□□□□ -1.19
BBS4-218	ENST00000569440	FANCI	Q9NVI1	1328 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	ATAD5	Q96QE3	1844 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	BRWD1	Q9NSI6	2320 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	WDR46	O15213	610 aa	Known RBP	7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	TBX10	O75333	385 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	CXCL10	P02778	98 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	ARID4A	P29374	1257 aa	Predicted RBP	7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	ICAM3	P32942	547 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	PLCD1	P51178	756 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	HTRA4	P83105	476 aa	Predicted RBP	7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	GPM6B	Q13491	265 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	BFSP2	Q13515	415 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	CNKSR3	Q6P9H4	555 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	NOL8	Q76FK4	1167 aa	Known RBP	7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	TTC6	Q86TZ1	520 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	DDX27	Q96GQ7	796 aa	Known RBP	7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	MSLNL	Q96KJ4	702 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	VCPKMT	Q9H867	229 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	CD207	Q9UJ71	328 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	PPP1R9A	Q9ULJ8	1098 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	GVINP1	Q7Z2Y8	2422 aa		7.6	□□□□□ -1.19
BBS4-218	ENST00000569440	RIF1	Q5UIP0	2472 aa	Known RBP	7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	ATP2A1	O14983	1001 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	IGSF3	O75054	1194 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	DYNLL1	P63167	89 aa	Known RBP	7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	EXOSC9	Q06265	439 aa	Known RBP	7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	ADAM15	Q13444	863 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	PPP1R15B	Q5SWA1	713 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	TMEM63B	Q5T3F8	832 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	IQSEC1	Q6DN90	963 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	KIAA2013	Q8IYS2	634 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	ZNF710	Q8N1W2	664 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	CRBN	Q96SW2	442 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	TEX13B	Q9BXU2	312 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	COPRS	Q9NQ92	184 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	PA2G4	Q9UQ80	394 aa	Known RBP	7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	AKAP2	Q9Y2D5	859 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	PCDHGC5	Q9Y5F6	944 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	CHD6	Q8TD26	2715 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	COL4A4	P53420	1690 aa	Predicted RBP	7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	SMCHD1	A6NHR9	2005 aa		7.59	□□□□□ -1.19
BBS4-218	ENST00000569440	MYH2	Q9UKX2	1941 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	ATRX	P46100	2492 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	LINC01565	O15544	149 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	NBN	O60934	754 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	EFCAB14	O75071	495 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	PURA	Q00577	322 aa	Known RBP	7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	PTPN11	Q06124	597 aa	Predicted RBP	7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	PTPN21	Q16825	1174 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	SMYD5	Q6GMV2	418 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	TAPT1	Q6NXT6	567 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	FAM117B	Q6P1L5	589 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	NFRKB	Q6P4R8	1299 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	TMEM179	Q6ZVK1	233 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	TMEM192	Q8IY95	271 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	SMRP1	Q8NCR6	262 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	KCNV2	Q8TDN2	545 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	AFAP1L1	Q8TED9	768 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	CTAGE1	Q96RT6	745 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	POLR3E	Q9NVU0	708 aa		7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.58	□□□□□ -1.2
BBS4-218	ENST00000569440	MPHOSPH10	O00566	681 aa	Known RBP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	PARN	O95453	639 aa	Known RBP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	SELP	P16109	830 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	RRP1	P56182	461 aa	Known RBP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	RBL2	Q08999	1139 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	TFCP2	Q12800	502 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	COASY	Q13057	564 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	IKBKE	Q14164	716 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	MFSD10	Q14728	455 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	LCE2D	Q5TA82	110 aa	Predicted RBP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	SNRNP48	Q6IEG0	339 aa	Known RBP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	FBXO11	Q86XK2	927 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	ANKRD35	Q8N283	1001 aa		7.57	□□□□□ -1.2
BBS4-218	ENST00000569440	FAM133A	Q8N9E0	248 aa		7.57	□□□□□ -1.2

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