RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CWC27Q6UX04 472 aaKnown RBP21.8■■□□□ 1.08
LINC01238-205ENST00000567549 CXCL17Q6UXB2 119 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 EEPD1Q7L9B9 569 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 PLEKHM2Q8IWE5 1019 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 DSCC1Q9BVC3 393 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 KRT23Q9C075 422 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 COL6A3P12111 3177 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 LAMA4Q16363 1823 aa21.8■■□□□ 1.08
LINC01238-205ENST00000567549 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.79■■□□□ 1.08
LINC01238-205ENST00000567549 KPNA6O60684 536 aa21.79■■□□□ 1.08
LINC01238-205ENST00000567549 TAPT1Q6NXT6 567 aa21.79■■□□□ 1.08
LINC01238-205ENST00000567549 RGS22Q8NE09 1264 aa21.79■■□□□ 1.08
LINC01238-205ENST00000567549 CTAGE5O15320 804 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 CALML3P27482 149 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 ASPRV1Q53RT3 343 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 MCF2L2Q86YR7 1114 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 TBC1D10CQ8IV04 446 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 SLC43A3Q8NBI5 491 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 PNMA1Q8ND90 353 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 SCFD2Q8WU76 684 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 CDX2Q99626 313 aaPredicted RBP21.78■■□□□ 1.08
LINC01238-205ENST00000567549 UBAC1Q9BSL1 405 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 WDR11Q9BZH6 1224 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 HIPK3Q9H422 1215 aa21.78■■□□□ 1.08
LINC01238-205ENST00000567549 NFIBO00712 420 aa21.77■■□□□ 1.08
LINC01238-205ENST00000567549 CD4P01730 458 aa21.77■■□□□ 1.08
LINC01238-205ENST00000567549 PPP2R5BQ15173 497 aa21.77■■□□□ 1.08
LINC01238-205ENST00000567549 RPUSD2Q8IZ73 545 aaKnown RBP21.77■■□□□ 1.08
LINC01238-205ENST00000567549 PPP1R12CQ9BZL4 782 aa21.77■■□□□ 1.08
LINC01238-205ENST00000567549 KDM4AO75164 1064 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 FOSL2P15408 326 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 DNAJB2P25686 324 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 RPS6P62753 249 aaKnown RBP21.76■■□□□ 1.07
LINC01238-205ENST00000567549 TRAF1Q13077 416 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 RASGRP2Q7LDG7 609 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.76■■□□□ 1.07
LINC01238-205ENST00000567549 RUFY2Q8WXA3 655 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 ZSCAN10Q96SZ4 725 aaPredicted RBP21.76■■□□□ 1.07
LINC01238-205ENST00000567549 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.76■■□□□ 1.07
LINC01238-205ENST00000567549 IL23AQ9NPF7 189 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 PDGFCQ9NRA1 345 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 ASTN1O14525 1302 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 ABCB11O95342 1321 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 NEDD4P46934 1319 aa21.76■■□□□ 1.07
LINC01238-205ENST00000567549 RBM47A0AV96 593 aaKnown RBP21.75■■□□□ 1.07
LINC01238-205ENST00000567549 DHX16O60231 1041 aaKnown RBP21.75■■□□□ 1.07
LINC01238-205ENST00000567549 CSF2RAP15509 400 aa21.75■■□□□ 1.07
LINC01238-205ENST00000567549 EPHB4P54760 987 aa21.75■■□□□ 1.07
LINC01238-205ENST00000567549 OR6J1Q8NGC5 347 aa21.75■■□□□ 1.07
LINC01238-205ENST00000567549 MAFAQ8NHW3 353 aaPredicted RBP21.75■■□□□ 1.07
LINC01238-205ENST00000567549 ANKS1AQ92625 1134 aa21.75■■□□□ 1.07
LINC01238-205ENST00000567549 FGBP02675 491 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 PFKMP08237 780 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 PARP1P09874 1014 aaKnown RBP21.74■■□□□ 1.07
LINC01238-205ENST00000567549 IRX5P78411 483 aaPredicted RBP21.74■■□□□ 1.07
LINC01238-205ENST00000567549 TRDNQ13061 729 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 TTLL4Q14679 1199 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 RAB30Q15771 203 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 SLC30A10Q6XR72 485 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 CLEC4DQ8WXI8 215 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 TIFAQ96CG3 184 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 MTG1Q9BT17 334 aaPredicted RBP21.74■■□□□ 1.07
LINC01238-205ENST00000567549 MSRAQ9UJ68 235 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 LCTP09848 1927 aa21.74■■□□□ 1.07
LINC01238-205ENST00000567549 CDC37Q16543 378 aaPredicted RBP21.73■■□□□ 1.07
LINC01238-205ENST00000567549 USH1GQ495M9 461 aa21.73■■□□□ 1.07
LINC01238-205ENST00000567549 TMEM240Q5SV17 173 aa21.73■■□□□ 1.07
LINC01238-205ENST00000567549 ZKSCAN3Q9BRR0 538 aa21.73■■□□□ 1.07
LINC01238-205ENST00000567549 MRPL11Q9Y3B7 192 aaKnown RBP21.73■■□□□ 1.07
LINC01238-205ENST00000567549 LAMA2P24043 3122 aaKnown RBP21.72■■□□□ 1.07
LINC01238-205ENST00000567549 IGHDP01880 384 aa21.72■■□□□ 1.07
LINC01238-205ENST00000567549 EDNRBP24530 442 aa21.72■■□□□ 1.07
LINC01238-205ENST00000567549 IFIT1BQ5T764 474 aaKnown RBP21.72■■□□□ 1.07
LINC01238-205ENST00000567549 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
LINC01238-205ENST00000567549 NSUN6Q8TEA1 469 aaKnown RBP21.72■■□□□ 1.07
LINC01238-205ENST00000567549 IWS1Q96ST2 819 aa21.72■■□□□ 1.07
LINC01238-205ENST00000567549 TTYH1Q9H313 450 aaPredicted RBP21.72■■□□□ 1.07
LINC01238-205ENST00000567549 MYH6P13533 1939 aa21.72■■□□□ 1.07
LINC01238-205ENST00000567549 B4E1Z4 1266 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 MYL3P08590 195 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 GOLGA8HP0CJ92 632 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 CYP2C18P33260 490 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 PURAQ00577 322 aaKnown RBP21.71■■□□□ 1.07
LINC01238-205ENST00000567549 PTPN11Q06124 597 aaPredicted RBP21.71■■□□□ 1.07
LINC01238-205ENST00000567549 ZNF365Q70YC5 407 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 MYLIPQ8WY64 445 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 HERVK_113Q902F9 699 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 GAS2L1Q99501 681 aaPredicted RBP21.71■■□□□ 1.07
LINC01238-205ENST00000567549 ALDH8A1Q9H2A2 487 aaPredicted RBP21.71■■□□□ 1.07
LINC01238-205ENST00000567549 ZNF576Q9H609 170 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 TNKSO95271 1327 aa21.71■■□□□ 1.07
LINC01238-205ENST00000567549 ERICH2A1L162 156 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 B4GALT4O60513 344 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 TXNP10599 105 aaKnown RBP21.7■■□□□ 1.06
LINC01238-205ENST00000567549 RASIP1Q5U651 963 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 NFRKBQ6P4R8 1299 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 FBXO11Q86XK2 927 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 ADGRF4Q8IZF3 695 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 SAMD3Q8N6K7 520 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 ENAHQ8N8S7 591 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms