RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 CEP44Q9C0F1 390 aa6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 TCF7L1Q9HCS4 588 aa6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 PNMA8BQ9ULN7 279 aaPredicted RBP6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 KDM5DQ9BY66 1539 aa6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 KIDINS220Q9ULH0 1771 aa6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 DIP2CQ9Y2E4 1556 aa6.23□□□□□ -1.41
VPS35P1-201ENST00000563400 NLRP1Q9C000 1473 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 A0A087WZG4 1122 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 BICDL2A1A5D9 508 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 M0R2C6 588 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 FZD9O00144 591 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 ORC4O43929 436 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 AK2P54819 239 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 ZBED6P86452 979 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 NUCB1Q02818 461 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 ODF1Q14990 250 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 KIAA1211LQ6NV74 962 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 OTOP3Q7RTS5 596 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 ANKRD23Q86SG2 305 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 SLC7A14Q8TBB6 771 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 MYD88Q99836 296 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 EFCC1Q9HA90 598 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 RIC8AQ9NPQ8 531 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 SEC31BQ9NQW1 1179 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 GGA1Q9UJY5 639 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 TNRQ92752 1358 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 NAIPQ13075 1403 aa6.22□□□□□ -1.41
VPS35P1-201ENST00000563400 A0A1W2PRQ8 180 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 FAM86C2PA6NEL3 165 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 EFSO43281 561 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 NPTXRO95502 500 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 MYBP10242 640 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 ACRP10323 421 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 BPIP17213 487 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 CYP2C19P33261 490 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 DDIT3P35638 169 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 MAPK9P45984 424 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 GRIA4P48058 902 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 USP14P54578 494 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 FAM193AP78312 1265 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 NCAPHQ15003 741 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 PLA2G4EQ3MJ16 856 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 SPECC1Q5M775 1068 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 C1orf122Q6ZSJ8 110 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 RSRC2Q7L4I2 434 aaKnown RBP6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 ZSCAN30Q86W11 494 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 NELL2Q99435 816 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 IFT22Q9H7X7 185 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 RRAGCQ9HB90 399 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 VTA1Q9NP79 307 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 ZC3H13Q5T200 1668 aaKnown RBP6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 PTPRMP28827 1452 aa6.21□□□□□ -1.42
VPS35P1-201ENST00000563400 A6NNZ2 444 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 C2CD2LO14523 706 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 XYLBO75191 536 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 JMJD7P0C870 316 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 SLC5A1P13866 664 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 LMNB1P20700 586 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 ZNF157P51786 506 aaPredicted RBP6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 NRLP54845 237 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 EIF5P55010 431 aaKnown RBP6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 RBM10P98175 930 aaKnown RBP6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 FAAP100Q0VG06 881 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 GTF2H3Q13889 308 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 SPRED3Q2MJR0 410 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 ZNF468Q5VIY5 522 aaPredicted RBP6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 UNC5AQ6ZN44 842 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 TMEM151AQ8N4L1 468 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 NELL1Q92832 810 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 PMEPA1Q969W9 287 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 TM9SF2Q99805 663 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 OSBPL5Q9H0X9 879 aaPredicted RBP6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 CSRNP2Q9H175 543 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 EPN3Q9H201 632 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 BRD7Q9NPI1 651 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 PGAP2Q9UHJ9 254 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 MKL2Q9ULH7 1088 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 CCDC144AA2RUR9 1427 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 PZPP20742 1482 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 FRMPD1Q5SYB0 1578 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 TRAV20A0A0B4J274 112 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 NEURL1BA8MQ27 555 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 METTL12A8MUP2 240 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 J3KRW8 73 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 ERC2O15083 957 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 OPA1O60313 960 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 TRPA1O75762 1119 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 ATE1O95260 518 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 GDF11O95390 407 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 LTFP02788 710 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 EDN3P14138 238 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 ACPPP15309 386 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 ALAS2P22557 587 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 INAVAQ3KP66 663 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 FCHSD1Q86WN1 690 aa6.2□□□□□ -1.42
VPS35P1-201ENST00000563400 CCNJLQ8IV13 435 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms