RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 SLC5A4Q9NY91 659 aa8.07□□□□□ -1.12
CDH1-203ENST00000561751 TMCO1Q9UM00 188 aa8.07□□□□□ -1.12
CDH1-203ENST00000561751 LRRC42Q9Y546 428 aa8.07□□□□□ -1.12
CDH1-203ENST00000561751 ASB3Q9Y575 518 aa8.07□□□□□ -1.12
CDH1-203ENST00000561751 NUB1Q9Y5A7 615 aa8.07□□□□□ -1.12
CDH1-203ENST00000561751 APBB1O00213 710 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 WASLO00401 505 aaPredicted RBP8.06□□□□□ -1.12
CDH1-203ENST00000561751 TRAPPC3O43617 180 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 MFAP3LO75121 409 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 RNF8O76064 485 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 BAG3O95817 575 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 ATP1A3P13637 1013 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 ATP4AP20648 1035 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 VAV2P52735 878 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 RBM5P52756 815 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDH1-203ENST00000561751 NLRP5P59047 1200 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 KRT83P78385 493 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 IFT88Q13099 833 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 MTMR2Q13614 643 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 SLC39A14Q15043 492 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 STK38Q15208 465 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 RAD9BQ6WBX8 426 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 CACNA2D3Q8IZS8 1091 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 WHAMMQ8TF30 809 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 CYFIP2Q96F07 1278 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 PHACTR3Q96KR7 559 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 ATP6V1G3Q96LB4 118 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 RMDN2Q96LZ7 410 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 NEK1Q96PY6 1258 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 SLX1AQ9BQ83 275 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 NUP58Q9BVL2 599 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 CDK19Q9BWU1 502 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 TRIM7Q9C029 511 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 FAM192AQ9GZU8 254 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 UBA5Q9GZZ9 404 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 CENPHQ9H3R5 247 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 CNOT10Q9H9A5 744 aaKnown RBP8.06□□□□□ -1.12
CDH1-203ENST00000561751 LMCD1Q9NZU5 365 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 WDR35Q9P2L0 1181 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 RPL26L1Q9UNX3 145 aaKnown RBP8.06□□□□□ -1.12
CDH1-203ENST00000561751 RIPOR2Q9Y4F9 1068 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 SAMM50Q9Y512 469 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 SLC4A7Q9Y6M7 1214 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 ABCC12Q96J65 1359 aa8.06□□□□□ -1.12
CDH1-203ENST00000561751 DNM1LO00429 736 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 ASAP2O43150 1006 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 FOXO3O43524 673 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 CREB3O43889 395 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 PDHBP11177 359 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 IDO1P14902 403 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 NR1D1P20393 614 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 ALDH3A1P30838 453 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 SARSP49591 514 aaKnown RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 ZNF131P52739 623 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 SPAG1Q07617 926 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 KCNH2Q12809 1159 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 MAP3K12Q12852 859 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 RASA3Q14644 834 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 KARSQ15046 597 aaKnown RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 LINC01559Q495D7 138 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 CCDC178Q5BJE1 867 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 SPDYCQ5MJ68 293 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 SH2D4BQ5SQS7 431 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 ACBD5Q5T8D3 534 aaPredicted RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 CCDC181Q5TID7 509 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 AGBL2Q5U5Z8 902 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 GKAP1Q5VSY0 366 aaPredicted RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 CCDC102BQ68D86 513 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 RSBN1LQ6PCB5 846 aaPredicted RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 RUFY4Q6ZNE9 571 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 LMNTD2Q8IXW0 634 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 PDILTQ8N807 584 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 NSUN7Q8NE18 718 aaKnown RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 IRGQQ8WZA9 623 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 BAP1Q92560 729 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 IQCDQ96DY2 449 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 SCLT1Q96NL6 688 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 LZTS2Q9BRK4 669 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 TSGA10Q9BZW7 698 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 RANBP17Q9H2T7 1088 aaKnown RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 NDST4Q9H3R1 872 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 ZSWIM4Q9H7M6 989 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 KCNMB3Q9NPA1 279 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 SPG7Q9UQ90 795 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDH1-203ENST00000561751 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.05□□□□□ -1.12
CDH1-203ENST00000561751 MED23Q9ULK4 1368 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 GLI3P10071 1580 aa8.05□□□□□ -1.12
CDH1-203ENST00000561751 ZMYM6O95789 1325 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 PNMA6EA0A0J9YXQ4 647 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 CCT8L1PA6NM43 557 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 ELL2O00472 640 aaPredicted RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 KRT86O43790 486 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 SYKP43405 635 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 CCT2P78371 535 aaKnown RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 MRPS25P82663 173 aaKnown RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 PABPC4Q13310 644 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms