RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ADGRG1Q9Y653 693 aa9.58□□□□□ -0.88
CCDC33-209ENST00000560565 GAKO14976 1311 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 NEDD4P46934 1319 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 GPR75-ASB3A0A0A6YYF3 556 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 EBAG9O00559 213 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 AOC2O75106 756 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 MFAP3LO75121 409 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SASH3O75995 380 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SEC31AO94979 1220 aaKnown RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 ATP1A3P13637 1013 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 PTPREP23469 700 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 TDO2P48775 406 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SARSP49591 514 aaKnown RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 ZNF157P51786 506 aaPredicted RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 GUCY1B3Q02153 619 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 ITIH3Q06033 890 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 PPFIA1Q13136 1202 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 TNFAIP1Q13829 316 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 MCM6Q14566 821 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 CASP8Q14790 479 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 PTPAQ15257 358 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SBK1Q52WX2 424 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SWT1Q5T5J6 900 aaKnown RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 KRT40Q6A162 431 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 NFXL1Q6ZNB6 911 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 MMS22LQ6ZRQ5 1243 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 AMOTL1Q8IY63 956 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 FAM76AQ8TAV0 307 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 BEGAINQ9BUH8 593 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 LRRC2Q9BYS8 371 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 FTOQ9C0B1 505 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 TDRD3Q9H7E2 651 aaKnown RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 NCOA5Q9HCD5 579 aaKnown RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 ARPP21Q9UBL0 812 aaPredicted RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 ZNF70Q9UC06 446 aaPredicted RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SRPRBQ9Y5M8 271 aaKnown RBP9.57□□□□□ -0.88
CCDC33-209ENST00000560565 PPP2R3BQ9Y5P8 575 aa9.57□□□□□ -0.88
CCDC33-209ENST00000560565 SYNRGQ9UMZ2 1314 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 MYH4Q9Y623 1939 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SRRM3A6NNA2 597 aaPredicted RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 GOLGA8AA7E2F4 631 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 UBE2Q2LH0YL09 131 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SH2B2O14492 632 aaPredicted RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 KRT86O43790 486 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 KIAA0754O94854 1291 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 DEXIO95424 95 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 FMNL1O95466 1100 aaPredicted RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 IFNAR1P17181 557 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 GUCY2CP25092 1073 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 CALRP27797 417 aaKnown RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 CYLC1P35663 651 aaPredicted RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 ARHGAP25P42331 645 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 NOP2P46087 812 aaKnown RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 AKAP17AQ02040 695 aaKnown RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 NOGQ13253 232 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 PNOCQ13519 176 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 STIM1Q13586 685 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 ZNF569Q5MCW4 686 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 AKNAD1Q5T1N1 836 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SHC4Q6S5L8 630 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 HHIPL2Q6UWX4 724 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 ARMC9Q7Z3E5 817 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 ADGRA1Q86SQ6 560 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 FAM177A1Q8N128 213 aaPredicted RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 STAG1Q8WVM7 1258 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 CCDC47Q96A33 483 aaKnown RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 ZDHHC15Q96MV8 337 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 WDR24Q96S15 920 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 MAP3K14Q99558 947 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 NCAPGQ9BPX3 1015 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 HSD3B7Q9H2F3 369 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 EPB41L4AQ9HCS5 686 aaPredicted RBP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 AATFQ9NY61 560 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC33-209ENST00000560565 MAN1B1Q9UKM7 699 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 MYO6Q9UM54 1294 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 SLC12A7Q9Y666 1083 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 TAF6LQ9Y6J9 622 aa9.56□□□□□ -0.88
CCDC33-209ENST00000560565 PAPPA2Q9BXP8 1791 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 EIF3CLB5ME19 914 aaKnown RBP9.55□□□□□ -0.88
CCDC33-209ENST00000560565 TCP10L2B9ZVM9 353 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
CCDC33-209ENST00000560565 TNNI2P48788 182 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 FOSBP53539 338 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 MDM2Q00987 491 aaPredicted RBP9.55□□□□□ -0.88
CCDC33-209ENST00000560565 PRKG1Q13976 671 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 RASA3Q14644 834 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 ALS2CLQ60I27 953 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 TOGARAM2Q6ZUX3 1019 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms