RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CYP39A1Q9NYL5 469 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 TSPY2A6NKD2 308 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 KIF28PB7ZC32 967 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 RFC2P35250 354 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 DUSP28Q4G0W2 176 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 TAPT1Q6NXT6 567 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 WNT8AQ9H1J5 351 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 PNMA2Q9UL42 364 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 ZNF536O15090 1300 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 GRIN2DO15399 1336 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 RAD50Q92878 1312 aa18.9■□□□□ 0.62
CDC42BPB-203ENST00000558867 M0R2C6 588 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 ERC2O15083 957 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 PSMC6P62333 389 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 NUCB1Q02818 461 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 PPARAQ07869 468 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 KCTD1Q719H9 257 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 RETREG2Q8NC44 543 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 SCLYQ96I15 445 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 RBM19Q9Y4C8 960 aaKnown RBP18.89■□□□□ 0.61
CDC42BPB-203ENST00000558867 KPNA6O60684 536 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 PHOSPHO2Q8TCD6 241 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 MTG1Q9BT17 334 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 DCTPP1Q9H773 170 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 COG5Q9UP83 839 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 TNKSO95271 1327 aa18.88■□□□□ 0.61
CDC42BPB-203ENST00000558867 B4DLN1 442 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 NKRFO15226 690 aaKnown RBP eCLIP18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 ICAM1P05362 532 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 MYL3P08590 195 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 BMP1P13497 986 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 POU3F3P20264 500 aaPredicted RBP18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 PLA2G5P39877 138 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 MRPL12P52815 198 aaKnown RBP18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 CCDC96Q2M329 555 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 DEFB128Q7Z7B8 93 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 MORC4Q8TE76 937 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 GBF1Q92538 1859 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 CHMP4CQ96CF2 233 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 BACH2Q9BYV9 841 aa18.87■□□□□ 0.61
CDC42BPB-203ENST00000558867 MYOGP15173 224 aa18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 MUM1L1Q5H9M0 696 aa18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 FAM47CQ5HY64 1035 aa18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 DCAF4Q8WV16 495 aa18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 FSD1Q9BTV5 496 aa18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 TRMT13Q9NUP7 481 aaKnown RBP18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 NOD1Q9Y239 953 aa18.86■□□□□ 0.61
CDC42BPB-203ENST00000558867 CHD7Q9P2D1 2997 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 TTC41PQ6P2S7 1318 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 CA3P07451 260 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 CYP2C9P11712 490 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 PDE4AP27815 886 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 ALDH5A1P51649 535 aaPredicted RBP18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 PURAQ00577 322 aaKnown RBP18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 BFSP2Q13515 415 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 TTLL4Q14679 1199 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDC42BPB-203ENST00000558867 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 RANBP6O60518 1105 aaKnown RBP18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 SNAP25P60880 206 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 PTPN11Q06124 597 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 BAATQ14032 418 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 PPP2R5BQ15173 497 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 NFRKBQ6P4R8 1299 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 RANBP17Q9H2T7 1088 aaKnown RBP18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 MTMR7Q9Y216 660 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 MTCH2Q9Y6C9 303 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 TRANK1O15050 2925 aa18.84■□□□□ 0.61
CDC42BPB-203ENST00000558867 TFF2Q03403 129 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 PDE4DQ08499 809 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 TSHZ3Q63HK5 1081 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 SKAP1Q86WV1 359 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 RAPGEFL1Q9UHV5 662 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 HCN4Q9Y3Q4 1203 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
CDC42BPB-203ENST00000558867 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 BAIAP3O94812 1187 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 KCNJ6P48051 423 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 NBPF20Q3BBV1 942 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 ZMYM1Q5SVZ6 1142 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 SYDE2Q5VT97 1194 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 SCFD2Q8WU76 684 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 ARNTL2Q8WYA1 636 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 HLA-CQ95604 372 aa18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 SEC62Q99442 399 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 ARIH1Q9Y4X5 557 aaPredicted RBP18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-203ENST00000558867 TCF20Q9UGU0 1960 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 IQCF3P0C7M6 154 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 PTGS1P23219 599 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms