RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 CCDC144CPQ8IYA2 1237 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ENAHQ8N8S7 591 aaPredicted RBP11.92□□□□□ -0.5
TPM1-212ENST00000558347 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ZSCAN10Q96SZ4 725 aaPredicted RBP11.92□□□□□ -0.5
TPM1-212ENST00000558347 CPVLQ9H3G5 476 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 XPNPEP3Q9NQH7 507 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.92□□□□□ -0.5
TPM1-212ENST00000558347 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ADAMTS4O75173 837 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 RTP1P59025 263 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 HS1BP3Q53T59 392 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 ANKS1AQ92625 1134 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 PURBQ96QR8 312 aaKnown RBP11.91□□□□□ -0.5
TPM1-212ENST00000558347 GDF15Q99988 308 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 UBA5Q9GZZ9 404 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 KATNBL1Q9H079 304 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 CYP39A1Q9NYL5 469 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 WDR19Q8NEZ3 1342 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 NFIBO00712 420 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 MAGEA10P43363 369 aaPredicted RBP11.91□□□□□ -0.5
TPM1-212ENST00000558347 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
TPM1-212ENST00000558347 CCDC178Q5BJE1 867 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
TPM1-212ENST00000558347 NSMFQ6X4W1 530 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 SLC39A5Q6ZMH5 540 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 CYB5R4Q7L1T6 521 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
TPM1-212ENST00000558347 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 NCOA7Q8NI08 942 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 KRT23Q9C075 422 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 ABHD16BQ9H3Z7 469 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 KAT14Q9H8E8 782 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 CNNM2Q9H8M5 875 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 FAM184BQ9ULE4 1060 aa11.91□□□□□ -0.5
TPM1-212ENST00000558347 PRPF40AO75400 957 aaKnown RBP11.9□□□□□ -0.5
TPM1-212ENST00000558347 CPA1P15085 419 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 EXOSC10Q01780 885 aaKnown RBP11.9□□□□□ -0.5
TPM1-212ENST00000558347 TRDNQ13061 729 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 SNX17Q15036 470 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 CCDC144BQ3MJ40 725 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
TPM1-212ENST00000558347 RNF180Q86T96 592 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 MB21D2Q8IYB1 491 aaPredicted RBP11.9□□□□□ -0.5
TPM1-212ENST00000558347 GPT2Q8TD30 523 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
TPM1-212ENST00000558347 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 PHF24Q9UPV7 400 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 ATP11BQ9Y2G3 1177 aa11.9□□□□□ -0.5
TPM1-212ENST00000558347 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
TPM1-212ENST00000558347 A0A1W2PQ45 241 aaPredicted RBP11.89□□□□□ -0.51
TPM1-212ENST00000558347 A0A1W2PQY0 241 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 MYADML2A6NDP7 307 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 DUSP11O75319 330 aaKnown RBP11.89□□□□□ -0.51
TPM1-212ENST00000558347 BMP8BP34820 402 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 BAATQ14032 418 aaPredicted RBP11.89□□□□□ -0.51
TPM1-212ENST00000558347 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
TPM1-212ENST00000558347 SEC23AQ15436 765 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
TPM1-212ENST00000558347 LRSAM1Q6UWE0 723 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 KLHDC9Q8NEP7 349 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 UBAC1Q9BSL1 405 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 MTA3Q9BTC8 594 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 LTBP2Q14767 1821 aa11.89□□□□□ -0.51
TPM1-212ENST00000558347 LAMA2P24043 3122 aaKnown RBP11.88□□□□□ -0.51
TPM1-212ENST00000558347 TCHHQ07283 1943 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 ASB14A6NK59 587 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
TPM1-212ENST00000558347 MCM5P33992 734 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 AK2P54819 239 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
TPM1-212ENST00000558347 TRIM60Q495X7 471 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 ASPRV1Q53RT3 343 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
TPM1-212ENST00000558347 SLC30A10Q6XR72 485 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 RALYLQ86SE5 291 aaKnown RBP11.88□□□□□ -0.51
TPM1-212ENST00000558347 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
TPM1-212ENST00000558347 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 PTPDC1A2A3K4 754 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 PDIA4P13667 645 aaKnown RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 PTGS1P23219 599 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 ACLYP53396 1101 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 GJA9P57773 515 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 KCNA10Q16322 511 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 CDC37Q16543 378 aaPredicted RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 USH1GQ495M9 461 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 TMEM63BQ5T3F8 832 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 C1orf53Q5VUE5 145 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 EEPD1Q7L9B9 569 aa11.87□□□□□ -0.51
TPM1-212ENST00000558347 FBXO16Q8IX29 292 aaPredicted RBP11.87□□□□□ -0.51
TPM1-212ENST00000558347 ADGRF4Q8IZF3 695 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms