RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 RFC2P35250 354 aa21.78■■□□□ 1.08
ABCD4-228ENST00000557588 PURAQ00577 322 aaKnown RBP21.78■■□□□ 1.08
ABCD4-228ENST00000557588 PDE4BQ07343 736 aa21.78■■□□□ 1.08
ABCD4-228ENST00000557588 KIAA1211Q6ZU35 1233 aa21.78■■□□□ 1.08
ABCD4-228ENST00000557588 IFNL3Q8IZI9 196 aa21.78■■□□□ 1.08
ABCD4-228ENST00000557588 SMARCA5O60264 1052 aaPredicted RBP21.77■■□□□ 1.08
ABCD4-228ENST00000557588 APPP05067 770 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 ACTN1P12814 892 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 MCCP23508 829 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 TFAP4Q01664 338 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 PPP4R3BQ5MIZ7 849 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 DEFB128Q7Z7B8 93 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 PHOSPHO2Q8TCD6 241 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 CHMP4BQ9H444 224 aaKnown RBP21.77■■□□□ 1.08
ABCD4-228ENST00000557588 PRR12Q9ULL5 1215 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 HCN4Q9Y3Q4 1203 aa21.77■■□□□ 1.08
ABCD4-228ENST00000557588 LOC102724159A0A0B4J2E5 919 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 PATL2C9JE40 543 aaKnown RBP21.76■■□□□ 1.07
ABCD4-228ENST00000557588 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 CPT1AP50416 773 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 TAP1Q03518 808 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 PWP2Q15269 919 aaKnown RBP21.76■■□□□ 1.07
ABCD4-228ENST00000557588 NSMFQ6X4W1 530 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 KCTD1Q719H9 257 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 LRFN3Q9BTN0 628 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 NACAP1Q9BZK3 213 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 CCPG1Q9ULG6 757 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 PTPRSQ13332 1948 aa21.76■■□□□ 1.07
ABCD4-228ENST00000557588 RBM47A0AV96 593 aaKnown RBP21.75■■□□□ 1.07
ABCD4-228ENST00000557588 TLL1O43897 1013 aa21.75■■□□□ 1.07
ABCD4-228ENST00000557588 ICAM1P05362 532 aa21.75■■□□□ 1.07
ABCD4-228ENST00000557588 SLC3A2P08195 630 aaKnown RBP21.75■■□□□ 1.07
ABCD4-228ENST00000557588 RCSD1Q6JBY9 416 aa21.75■■□□□ 1.07
ABCD4-228ENST00000557588 PURBQ96QR8 312 aaKnown RBP21.75■■□□□ 1.07
ABCD4-228ENST00000557588 MTG1Q9BT17 334 aaPredicted RBP21.75■■□□□ 1.07
ABCD4-228ENST00000557588 EPHX3Q9H6B9 360 aa21.75■■□□□ 1.07
ABCD4-228ENST00000557588 CERS4Q9HA82 394 aa21.75■■□□□ 1.07
ABCD4-228ENST00000557588 ADD3Q9UEY8 706 aaKnown RBP21.75■■□□□ 1.07
ABCD4-228ENST00000557588 ARHGEF15O94989 841 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 ALDH5A1P51649 535 aaPredicted RBP21.74■■□□□ 1.07
ABCD4-228ENST00000557588 SNAP25P60880 206 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 PPARAQ07869 468 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 KRT40Q6A162 431 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 RASGRP2Q7LDG7 609 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 HERC6Q8IVU3 1022 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 ARNTL2Q8WYA1 636 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 GPATCH3Q96I76 525 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 WDR11Q9BZH6 1224 aa21.74■■□□□ 1.07
ABCD4-228ENST00000557588 TSHZ3Q63HK5 1081 aa21.73■■□□□ 1.07
ABCD4-228ENST00000557588 NFRKBQ6P4R8 1299 aa21.73■■□□□ 1.07
ABCD4-228ENST00000557588 HLA-CQ95604 372 aa21.73■■□□□ 1.07
ABCD4-228ENST00000557588 CHMP4CQ96CF2 233 aa21.73■■□□□ 1.07
ABCD4-228ENST00000557588 RANBP17Q9H2T7 1088 aaKnown RBP21.73■■□□□ 1.07
ABCD4-228ENST00000557588 STX8Q9UNK0 236 aa21.73■■□□□ 1.07
ABCD4-228ENST00000557588 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
ABCD4-228ENST00000557588 BAIAP3O94812 1187 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 MYL3P08590 195 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 IQCF3P0C7M6 154 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 LRRFIP1Q32MZ4 808 aaKnown RBP21.72■■□□□ 1.07
ABCD4-228ENST00000557588 TMEM31Q5JXX7 168 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 OR6J1Q8NGC5 347 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 NAPBQ9H115 298 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 RAD50Q92878 1312 aa21.72■■□□□ 1.07
ABCD4-228ENST00000557588 TET1Q8NFU7 2136 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 NOVP48745 357 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 PTPN11Q06124 597 aaPredicted RBP21.71■■□□□ 1.07
ABCD4-228ENST00000557588 GRB10Q13322 594 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 BAATQ14032 418 aaPredicted RBP21.71■■□□□ 1.07
ABCD4-228ENST00000557588 NBPF20Q3BBV1 942 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 FAM47CQ5HY64 1035 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 GPHNQ9NQX3 736 aaPredicted RBP21.71■■□□□ 1.07
ABCD4-228ENST00000557588 IL17RBQ9NRM6 502 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 BRWD1Q9NSI6 2320 aa21.71■■□□□ 1.07
ABCD4-228ENST00000557588 KIF28PB7ZC32 967 aa21.7■■□□□ 1.06
ABCD4-228ENST00000557588 NFIBO00712 420 aa21.7■■□□□ 1.06
ABCD4-228ENST00000557588 NKRFO15226 690 aaKnown RBP eCLIP21.7■■□□□ 1.06
ABCD4-228ENST00000557588 LPXNO60711 386 aa21.7■■□□□ 1.06
ABCD4-228ENST00000557588 BRDTQ58F21 947 aaPredicted RBP21.7■■□□□ 1.06
ABCD4-228ENST00000557588 RETREG2Q8NC44 543 aa21.7■■□□□ 1.06
ABCD4-228ENST00000557588 DCAF4Q8WV16 495 aa21.7■■□□□ 1.06
ABCD4-228ENST00000557588 PIEZO1Q92508 2521 aa21.7■■□□□ 1.06
ABCD4-228ENST00000557588 A6NJR5 290 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 TSPY2A6NKD2 308 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 NMT2O60551 498 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 KPNA6O60684 536 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 BFSP2Q13515 415 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 PPP2R5BQ15173 497 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 BTNL9Q6UXG8 535 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 SLC30A10Q6XR72 485 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 SEC62Q99442 399 aaKnown RBP21.69■■□□□ 1.06
ABCD4-228ENST00000557588 FTOQ9C0B1 505 aaKnown RBP eCLIP21.69■■□□□ 1.06
ABCD4-228ENST00000557588 C11orf16Q9NQ32 467 aa21.69■■□□□ 1.06
ABCD4-228ENST00000557588 GPR37L1O60883 481 aa21.68■■□□□ 1.06
ABCD4-228ENST00000557588 EDNRBP24530 442 aa21.68■■□□□ 1.06
ABCD4-228ENST00000557588 CCDC96Q2M329 555 aa21.68■■□□□ 1.06
ABCD4-228ENST00000557588 SPRED2Q7Z698 418 aa21.68■■□□□ 1.06
ABCD4-228ENST00000557588 FOXP2O15409 715 aa21.67■■□□□ 1.06
ABCD4-228ENST00000557588 SCFD2Q8WU76 684 aa21.67■■□□□ 1.06
ABCD4-228ENST00000557588 KHSRPQ92945 711 aaKnown RBP eCLIP21.67■■□□□ 1.06
ABCD4-228ENST00000557588 LMCD1Q9NZU5 365 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms