RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSEN1-223ENST00000557511 UNC93B1Q9H1C4 597 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 RANBP17Q9H2T7 1088 aaKnown RBP9.69□□□□□ -0.86
PSEN1-223ENST00000557511 VAT1LQ9HCJ6 419 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 DIS3Q9Y2L1 958 aaKnown RBP9.69□□□□□ -0.86
PSEN1-223ENST00000557511 MYH4Q9Y623 1939 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 SLC12A7Q9Y666 1083 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 B4DLN1 442 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 KLRF2D3W0D1 207 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 MSCO60682 206 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 DDAH1O94760 285 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 LIFRP42702 1097 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 MRPL12P52815 198 aaKnown RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 SNAP25P60880 206 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 BLOC1S2Q6QNY1 142 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 NSMFQ6X4W1 530 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 MSL3Q8N5Y2 521 aaKnown RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 NPLOC4Q8TAT6 608 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 DEFB118Q96PH6 123 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 LZTS2Q9BRK4 669 aa9.68□□□□□ -0.86
PSEN1-223ENST00000557511 ADD3Q9UEY8 706 aaKnown RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 NAP1L2Q9ULW6 460 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-223ENST00000557511 ABCB11O95342 1321 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 PTPDC1A2A3K4 754 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 ASB14A6NK59 587 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-223ENST00000557511 SH2B2O14492 632 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-223ENST00000557511 COBLO75128 1261 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 SGPL1O95470 568 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 PGK2P07205 417 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 CYP2C19P33261 490 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 HSPA4P34932 840 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 GJA8P48165 433 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 CACNB2Q08289 660 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-223ENST00000557511 GRM4Q14833 912 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 CCL14Q16627 93 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 USH1GQ495M9 461 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 RASGRP2Q7LDG7 609 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 FBXO11Q86XK2 927 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 MCF2L2Q86YR7 1114 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 ADGRF4Q8IZF3 695 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 ZNF654Q8IZM8 581 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 IGDCC4Q8TDY8 1250 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 MAML3Q96JK9 1138 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 JAKMIP1Q96N16 626 aaKnown RBP9.67□□□□□ -0.86
PSEN1-223ENST00000557511 MAP3K14Q99558 947 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 SEC63Q9UGP8 760 aaKnown RBP9.67□□□□□ -0.86
PSEN1-223ENST00000557511 NRBP1Q9UHY1 535 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 MRPL11Q9Y3B7 192 aaKnown RBP9.67□□□□□ -0.86
PSEN1-223ENST00000557511 RIPK3Q9Y572 518 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 TAF6LQ9Y6J9 622 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 MGAMO43451 1857 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 ZSWIM8A7E2V4 1837 aa9.67□□□□□ -0.86
PSEN1-223ENST00000557511 A0A0G2JMZ2 1700 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 EN2P19622 333 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-223ENST00000557511 RGS19P49795 217 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 ANTXR2P58335 489 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 ZNF792Q3KQV3 632 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 RNF207Q6ZRF8 634 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 HOMER1Q86YM7 354 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
PSEN1-223ENST00000557511 TINF2Q9BSI4 451 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 AMNQ9BXJ7 453 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 LY9Q9HBG7 655 aa9.66□□□□□ -0.86
PSEN1-223ENST00000557511 NPDC1Q9NQX5 325 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-223ENST00000557511 ZNF536O15090 1300 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 SYNGAP1Q96PV0 1343 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 CCDC196A0A1B0GTZ2 297 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 ZBTB5O15062 677 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 FARP2O94887 1054 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 CALML3P27482 149 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 TROAPQ12815 778 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 TRIM32Q13049 653 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 PTGDRQ13258 359 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 MICU3Q86XE3 530 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 RRP36Q96EU6 259 aaKnown RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 HTATIP2Q9BUP3 242 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 LRRC2Q9BYS8 371 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 MAF1Q9H063 256 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 SPC25Q9HBM1 224 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 A1CFQ9NQ94 594 aaKnown RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 PAK6Q9NQU5 681 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 RBM28Q9NW13 759 aaKnown RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 FLRT1Q9NZU1 646 aa9.65□□□□□ -0.86
PSEN1-223ENST00000557511 SEPT9Q9UHD8 586 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 DDX20Q9UHI6 824 aaKnown RBP9.65□□□□□ -0.86
PSEN1-223ENST00000557511 MAD2L2Q9UI95 211 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms