RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SYNPO2Q9UMS6 1093 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 ZNF536O15090 1300 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 KCNJ6P48051 423 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 CPT1AP50416 773 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 PURAQ00577 322 aaKnown RBP16.56■□□□□ 0.24
ACTN1-219ENST00000556432 DUSP28Q4G0W2 176 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 MUM1L1Q5H9M0 696 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
ACTN1-219ENST00000556432 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 STAG1Q8WVM7 1258 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 C11orf16Q9NQ32 467 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 SCN5AQ14524 2016 aa16.56■□□□□ 0.24
ACTN1-219ENST00000556432 MCCP23508 829 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 BRDTQ58F21 947 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-219ENST00000556432 OR6J1Q8NGC5 347 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 PURBQ96QR8 312 aaKnown RBP16.55■□□□□ 0.24
ACTN1-219ENST00000556432 UIMC1Q96RL1 719 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 MTG1Q9BT17 334 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-219ENST00000556432 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 MTMR7Q9Y216 660 aa16.55■□□□□ 0.24
ACTN1-219ENST00000556432 BRWD1Q9NSI6 2320 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 RAD50Q92878 1312 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 BFSP2Q13515 415 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 SPRED2Q7Z698 418 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 EPB41L4AQ9HCS5 686 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-219ENST00000556432 ADD3Q9UEY8 706 aaKnown RBP16.54■□□□□ 0.24
ACTN1-219ENST00000556432 MTUS1Q9ULD2 1270 aa16.54■□□□□ 0.24
ACTN1-219ENST00000556432 PI4K2BG5E9Z4 385 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 PITPNM1O00562 1244 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 GPAA1O43292 621 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
ACTN1-219ENST00000556432 IQCF3P0C7M6 154 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 SSTR3P32745 418 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-219ENST00000556432 TFAP4Q01664 338 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 PDE4BQ07343 736 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 APPBP2Q92624 585 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
ACTN1-219ENST00000556432 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-219ENST00000556432 PLIN4Q96Q06 1357 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 LPXNO60711 386 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 GNAT2P19087 354 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 CCDC96Q2M329 555 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 NEDD1Q8NHV4 660 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 CRBNQ96SW2 442 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 CD320Q9NPF0 282 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
ACTN1-219ENST00000556432 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-219ENST00000556432 BAATQ14032 418 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-219ENST00000556432 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 TMCO2Q7Z6W1 182 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-219ENST00000556432 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 MORC4Q8TE76 937 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 UBE2ZQ9H832 354 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-219ENST00000556432 PRR12Q9ULL5 1215 aa16.51■□□□□ 0.23
ACTN1-219ENST00000556432 TANC1Q9C0D5 1861 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 PRR33A8MZF0 331 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
ACTN1-219ENST00000556432 SMARCA5O60264 1052 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-219ENST00000556432 KCNA5P22460 613 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
ACTN1-219ENST00000556432 PDE4DQ08499 809 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 RCSD1Q6JBY9 416 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 GJD3Q8N144 294 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 KBTBD3Q8NAB2 608 aa16.5■□□□□ 0.23
ACTN1-219ENST00000556432 M0R2C6 588 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 KPNA6O60684 536 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 PLA2G6O60733 806 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 ICAM1P05362 532 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 MS4A1P11836 297 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 CALML3P27482 149 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 PTGISQ16647 500 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
ACTN1-219ENST00000556432 NAPBQ9H115 298 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 LMCD1Q9NZU5 365 aa16.49■□□□□ 0.23
ACTN1-219ENST00000556432 TSPY2A6NKD2 308 aa16.48■□□□□ 0.23
ACTN1-219ENST00000556432 PATL2C9JE40 543 aaKnown RBP16.48■□□□□ 0.23
ACTN1-219ENST00000556432 NFIBO00712 420 aa16.48■□□□□ 0.23
ACTN1-219ENST00000556432 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms