RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CNOT6Q9ULM6 557 aaKnown RBP5.45□□□□□ -1.54
ATXN3-240ENST00000556339 SPATA31A1Q5TZJ5 1347 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 EVC2Q86UK5 1308 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 USP32Q8NFA0 1604 aa5.45□□□□□ -1.54
ATXN3-240ENST00000556339 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 RFXAPO00287 272 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 SEMA7AO75326 666 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 GLI3P10071 1580 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 DLG4P78352 724 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 PSMD2Q13200 908 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 EZH2Q15910 746 aaKnown RBP5.44□□□□□ -1.54
ATXN3-240ENST00000556339 TOM1L2Q6ZVM7 507 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 PHACTR4Q8IZ21 702 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 ANKS4BQ8N8V4 417 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 MCOLN1Q9GZU1 580 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 ZCCHC4Q9H5U6 513 aa5.44□□□□□ -1.54
ATXN3-240ENST00000556339 TULP4Q9NRJ4 1543 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.43□□□□□ -1.54
ATXN3-240ENST00000556339 NWD2Q9ULI1 1742 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 PATL2C9JE40 543 aaKnown RBP5.43□□□□□ -1.54
ATXN3-240ENST00000556339 SRFP11831 508 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 BMP7P18075 431 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 TAF1CQ15572 869 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-240ENST00000556339 TIGD5Q53EQ6 642 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 PPP1R1BQ9UD71 204 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-240ENST00000556339 YBX2Q9Y2T7 364 aaKnown RBP5.43□□□□□ -1.54
ATXN3-240ENST00000556339 THRAP3Q9Y2W1 955 aaKnown RBP5.43□□□□□ -1.54
ATXN3-240ENST00000556339 PLCH1Q4KWH8 1693 aa5.43□□□□□ -1.54
ATXN3-240ENST00000556339 ADGRB1O14514 1584 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 COL14A1Q05707 1796 aaKnown RBP5.42□□□□□ -1.54
ATXN3-240ENST00000556339 PPIP5K1Q6PFW1 1433 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 SSU72P8A0A1W2PR75 194 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 F6X3S4 739 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 EXOC5O00471 708 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 LRRN2O75325 713 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 GBP1P32455 592 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 BUD31P41223 144 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-240ENST00000556339 SNX17Q15036 470 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 DDB1Q16531 1140 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 ZNF385BQ569K4 471 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 ADGRF1Q5T601 910 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 TCERG1LQ5VWI1 586 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 BNC2Q6ZN30 1099 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-240ENST00000556339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATXN3-240ENST00000556339 SIRT2Q8IXJ6 389 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 KCNH5Q8NCM2 988 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 PPP1R13LQ8WUF5 828 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 CCDC74BQ96LY2 380 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 KREMEN1Q96MU8 473 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 NOC4LQ9BVI4 516 aaKnown RBP5.42□□□□□ -1.54
ATXN3-240ENST00000556339 ASPNQ9BXN1 380 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 RNF19AQ9NV58 838 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 ZMYM5Q9UJ78 669 aa5.42□□□□□ -1.54
ATXN3-240ENST00000556339 ROCK2O75116 1388 aaKnown RBP5.42□□□□□ -1.54
ATXN3-240ENST00000556339 ITSN1Q15811 1721 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 OR14I1A6ND48 311 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 PEX10O60683 326 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 HOXA5P20719 270 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 RPL10P27635 214 aaKnown RBP5.41□□□□□ -1.54
ATXN3-240ENST00000556339 GALK1P51570 392 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 NR0B2Q15466 257 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 SLC14A2Q15849 920 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 HDGFL2Q7Z4V5 671 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-240ENST00000556339 CCDC84Q86UT8 332 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-240ENST00000556339 SLFN12Q8IYM2 578 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 BAHD1Q8TBE0 780 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-240ENST00000556339 CAMKK2Q96RR4 588 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 CARD11Q9BXL7 1154 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 REV1Q9UBZ9 1251 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 PARP2Q9UGN5 583 aa5.41□□□□□ -1.54
ATXN3-240ENST00000556339 POLR3AO14802 1390 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-240ENST00000556339 TRPM3Q9HCF6 1732 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-240ENST00000556339 ATP7BP35670 1465 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 TEX51A0A1B0GUA7 166 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 MYOCOSA0A1B0GUC4 107 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 ANKRD33BA6NCL7 494 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 GRIN3BO60391 1043 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 PSPNO60542 156 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 GBP2P32456 591 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-240ENST00000556339 ST13P50502 369 aaKnown RBP5.4□□□□□ -1.54
ATXN3-240ENST00000556339 TMEM201Q5SNT2 666 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 RELL1Q8IUW5 271 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 GATAD2BQ8WXI9 593 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 SGPP1Q9BX95 441 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 SP110Q9HB58 689 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 PARD6AQ9NPB6 346 aa5.4□□□□□ -1.54
ATXN3-240ENST00000556339 ADGRB2O60241 1585 aa5.4□□□□□ -1.55
ATXN3-240ENST00000556339 TTC21BQ7Z4L5 1316 aa5.4□□□□□ -1.55
ATXN3-240ENST00000556339 ALS2Q96Q42 1657 aa5.4□□□□□ -1.55
ATXN3-240ENST00000556339 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.55
ATXN3-240ENST00000556339 KTN1Q86UP2 1357 aaKnown RBP5.4□□□□□ -1.55
ATXN3-240ENST00000556339 ARHGEF28Q8N1W1 1705 aaKnown RBP5.4□□□□□ -1.55
ATXN3-240ENST00000556339 SSH2Q76I76 1423 aa5.4□□□□□ -1.55
ATXN3-240ENST00000556339 SHISA3A0PJX4 238 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 CILPO75339 1184 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 F13A1P00488 732 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 PF4P02776 101 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 TEKQ02763 1124 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms