RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 RRP12Q5JTH9 1297 aaKnown RBP7.92□□□□□ -1.14
PSEN1-216ENST00000556066 KCTD1Q719H9 257 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 RNF180Q86T96 592 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 METTL3Q86U44 580 aaKnown RBP7.92□□□□□ -1.14
PSEN1-216ENST00000556066 RILPL2Q969X0 211 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 FAM227BQ96M60 508 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 SLC38A10Q9HBR0 1119 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 NRBP1Q9UHY1 535 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 ZHX1Q9UKY1 873 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-216ENST00000556066 SYNPO2Q9UMS6 1093 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 PLIN4Q96Q06 1357 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 PRUNE2Q8WUY3 3088 aa7.92□□□□□ -1.14
PSEN1-216ENST00000556066 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 A0A0D9SFI3 127 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 ATP2A1O14983 1001 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 ZNF865P0CJ78 1059 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-216ENST00000556066 AKR1A1P14550 325 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 SNAP25P60880 206 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 NMIQ13287 307 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-216ENST00000556066 CCDC96Q2M329 555 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 MCMDC2Q4G0Z9 681 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 CCDC174Q6PII3 467 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 CHST13Q8NET6 341 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 CHURC1Q8WUH1 139 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 PHOX2BQ99453 314 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 KDM4CQ9H3R0 1056 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 RWDD1Q9H446 243 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-216ENST00000556066 IL17RBQ9NRM6 502 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 HELLSQ9NRZ9 838 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 FBXO40Q9UH90 709 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 FAM184BQ9ULE4 1060 aa7.91□□□□□ -1.14
PSEN1-216ENST00000556066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
PSEN1-216ENST00000556066 MYH6P13533 1939 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 SYNRGQ9UMZ2 1314 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 PQBP1O60828 265 aaKnown RBP7.9□□□□□ -1.14
PSEN1-216ENST00000556066 SNAI1O95863 264 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-216ENST00000556066 FGAP02671 866 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 FDX1P10109 184 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 ALAS1P13196 640 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 OAZ1P54368 228 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 HAND2P61296 217 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 CNTN2Q02246 1040 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 TLE2Q04725 743 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 RCSD1Q6JBY9 416 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 NOL8Q76FK4 1167 aaKnown RBP7.9□□□□□ -1.14
PSEN1-216ENST00000556066 RASGRP2Q7LDG7 609 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 ZNF589Q86UQ0 364 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-216ENST00000556066 FAM160B2Q86V87 743 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.9□□□□□ -1.14
PSEN1-216ENST00000556066 PARP9Q8IXQ6 854 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 MSL3Q8N5Y2 521 aaKnown RBP7.9□□□□□ -1.14
PSEN1-216ENST00000556066 STAG1Q8WVM7 1258 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 AGBL1Q96MI9 1066 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 GUCD1Q96NT3 240 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 ACAD9Q9H845 621 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 RNF146Q9NTX7 359 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 ANAPC4Q9UJX5 808 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 TACC3Q9Y6A5 838 aa7.9□□□□□ -1.14
PSEN1-216ENST00000556066 CCDC171Q6TFL3 1326 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 A0A1W2PQ45 241 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-216ENST00000556066 A0A1W2PQY0 241 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 NRG2O14511 850 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-216ENST00000556066 ORC4O43929 436 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 NEFLP07196 543 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 C6orf222P0C671 652 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-216ENST00000556066 HSPD1P10809 573 aaKnown RBP7.89□□□□□ -1.15
PSEN1-216ENST00000556066 SLC16A2P36021 539 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 ACVR2BQ13705 512 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 SNX17Q15036 470 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 ALX1Q15699 326 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 KCNA10Q16322 511 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 CCDC144BQ3MJ40 725 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 MAMDC4Q6UXC1 1216 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 ARMCX2Q7L311 632 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 SH3RF1Q7Z6J0 888 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 CHD1LQ86WJ1 897 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 CCDC144CPQ8IYA2 1237 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 EXOC6Q8TAG9 804 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 BADQ92934 168 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 VTI1AQ96AJ9 217 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 TRERF1Q96PN7 1200 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 TMUB1Q9BVT8 246 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 ABHD16BQ9H3Z7 469 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 SPC25Q9HBM1 224 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 GPCPD1Q9NPB8 672 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 STARD7Q9NQZ5 370 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 PDLIM7Q9NR12 457 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 CCPG1Q9ULG6 757 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 PRR12Q9ULL5 1215 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 LCTP09848 1927 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 LAMA4Q16363 1823 aa7.89□□□□□ -1.15
PSEN1-216ENST00000556066 ZNF536O15090 1300 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 FRMPD2Q68DX3 1309 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-216ENST00000556066 TRIM43BA6NCK2 446 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 MYADML2A6NDP7 307 aa7.88□□□□□ -1.15
PSEN1-216ENST00000556066 ADAMTS4O75173 837 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms