RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 NSMFQ6X4W1 530 aa12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 RALYLQ86SE5 291 aaKnown RBP12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 KLHDC9Q8NEP7 349 aa12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 CLEC4DQ8WXI8 215 aa12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 SPC25Q9HBM1 224 aa12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
PTCD2P1-201ENST00000554393 ERICH2A1L162 156 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 E7EWF7 191 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 NFIBO00712 420 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 SYN1P17600 705 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 GJA9P57773 515 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 BAATQ14032 418 aaPredicted RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 SART3Q15020 963 aaKnown RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 IER5LQ5T953 404 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 CCSAPQ6IQ19 270 aaPredicted RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 KIAA1211Q6ZU35 1233 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 CYB5R4Q7L1T6 521 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 ADGRF4Q8IZF3 695 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 PCSK9Q8NBP7 692 aaKnown RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 NUP133Q8WUM0 1156 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 VTA1Q9NP79 307 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 KIAA1217Q5T5P2 1943 aa12.15□□□□□ -0.46
PTCD2P1-201ENST00000554393 ABCB11O95342 1321 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 A0A1W2PQ45 241 aaPredicted RBP12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 A0A1W2PQY0 241 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 SOX1O00570 391 aaPredicted RBP12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 ADCY6O43306 1168 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 COL9A1P20849 921 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 MAGEA10P43363 369 aaPredicted RBP12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 ALDH5A1P51649 535 aaPredicted RBP12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 ACLYP53396 1101 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 DNERQ8NFT8 737 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 MPHOSPH6Q99547 160 aaKnown RBP12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 MTA3Q9BTC8 594 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 UBA5Q9GZZ9 404 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 PRKAG2Q9UGJ0 569 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 ATP11BQ9Y2G3 1177 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
PTCD2P1-201ENST00000554393 BAZ2BQ9UIF8 2168 aaKnown RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 ELP1O95163 1332 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 PTPDC1A2A3K4 754 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 RPS6P62753 249 aaKnown RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 TNFAIP2Q03169 654 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 KCNA10Q16322 511 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 TRIM60Q495X7 471 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 IQSEC1Q6DN90 963 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 MB21D2Q8IYB1 491 aaPredicted RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 LSG1Q9H089 658 aaKnown RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 CPVLQ9H3G5 476 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 JMJD4Q9H9V9 463 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 Q9Y3F1 56 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
PTCD2P1-201ENST00000554393 B4DLN1 442 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 CTAGE5O15320 804 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 EDNRBP24530 442 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 CALML3P27482 149 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 TROAPQ12815 778 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 TRAF1Q13077 416 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 GRM4Q14833 912 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 WTAPQ15007 396 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 USH1GQ495M9 461 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 ANKRD33Q7Z3H0 272 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MCF2L2Q86YR7 1114 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 STAG2Q8N3U4 1231 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 GLT1D1Q96MS3 346 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MAP3K14Q99558 947 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 LBHD1Q9BQE6 289 aaPredicted RBP12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MRPL11Q9Y3B7 192 aaKnown RBP12.12□□□□□ -0.47
PTCD2P1-201ENST00000554393 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
PTCD2P1-201ENST00000554393 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms