RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 ADCYAP1R1P41586 468 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 ALDH5A1P51649 535 aaPredicted RBP11.87□□□□□ -0.51
LINC00517-201ENST00000553396 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
LINC00517-201ENST00000553396 RNF180Q86T96 592 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 RAB11FIP4Q86YS3 637 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 PIBF1Q8WXW3 757 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 TMEM87BQ96K49 555 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 PIGSQ96S52 555 aa11.87□□□□□ -0.51
LINC00517-201ENST00000553396 ADD3Q9UEY8 706 aaKnown RBP11.87□□□□□ -0.51
LINC00517-201ENST00000553396 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
LINC00517-201ENST00000553396 CCDC69A6NI79 296 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 ZBTB5O15062 677 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 PPP1R11O60927 126 aaPredicted RBP11.86□□□□□ -0.51
LINC00517-201ENST00000553396 DDAH1O94760 285 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 SYN1P17600 705 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 PTGS1P23219 599 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
LINC00517-201ENST00000553396 ADCK5Q3MIX3 580 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
LINC00517-201ENST00000553396 TBC1D5Q92609 795 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 PDGFCQ9NRA1 345 aa11.86□□□□□ -0.51
LINC00517-201ENST00000553396 CYTH3O43739 400 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 DUSP11O75319 330 aaKnown RBP11.85□□□□□ -0.51
LINC00517-201ENST00000553396 C6orf222P0C671 652 aaPredicted RBP11.85□□□□□ -0.51
LINC00517-201ENST00000553396 RTP1P59025 263 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 PDE4DQ08499 809 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 MICU3Q86XE3 530 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 MCF2L2Q86YR7 1114 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 RIOX1Q9H6W3 641 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 PHF24Q9UPV7 400 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
LINC00517-201ENST00000553396 ATP11BQ9Y2G3 1177 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
LINC00517-201ENST00000553396 PCDHA1Q9Y5I3 950 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 SLC12A7Q9Y666 1083 aa11.85□□□□□ -0.51
LINC00517-201ENST00000553396 KIAA1217Q5T5P2 1943 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 REC8O95072 547 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 PLEKHA8P1O95397 391 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 CFBP00751 764 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 CPA1P15085 419 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 SMPD1P17405 629 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 KIF5BP33176 963 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 LIFRP42702 1097 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 KRT32Q14532 448 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 TAPT1Q6NXT6 567 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 TLK2Q86UE8 772 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
LINC00517-201ENST00000553396 TMTC2Q8N394 836 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 SYTL5Q8TDW5 730 aaPredicted RBP11.84□□□□□ -0.51
LINC00517-201ENST00000553396 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 VTA1Q9NP79 307 aa11.84□□□□□ -0.51
LINC00517-201ENST00000553396 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 A0A1W2PQ45 241 aaPredicted RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 A0A1W2PQY0 241 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 OPLAHO14841 1288 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 HSPA4P34932 840 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 ACLYP53396 1101 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 BEX3Q00994 111 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 KCNA10Q16322 511 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 TRIM60Q495X7 471 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 KLHDC9Q8NEP7 349 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 MAP3K14Q99558 947 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 UPF3AQ9H1J1 476 aaKnown RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 SPC25Q9HBM1 224 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 GNEQ9Y223 722 aaKnown RBP11.83□□□□□ -0.52
LINC00517-201ENST00000553396 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
LINC00517-201ENST00000553396 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 ASGR1P07306 291 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 CALM1P0DP23 149 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 CALM2P0DP24 149 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 CALM3P0DP25 149 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 EIF2AK2P19525 551 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 EDNRBP24530 442 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 CST5P28325 142 aaPredicted RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 GJA9P57773 515 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 FGD1P98174 961 aa11.82□□□□□ -0.52
LINC00517-201ENST00000553396 EXOSC10Q01780 885 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
LINC00517-201ENST00000553396 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms