RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 COBLO75128 1261 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 CYP2B6P20813 491 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 RPS6P62753 249 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 HMGN5P82970 282 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 TYW1BQ6NUM6 668 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 MAP3K20Q9NYL2 800 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 HOXC6P09630 235 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 IRF5Q13568 498 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 PKN2Q16513 984 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 RAET1EQ8TD07 263 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 PSTPIP2Q9H939 334 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 SH3GLB2Q9NR46 395 aa26.67■■□□□ 1.86
SMARCD1-203ENST00000547247 GCOM1H8Y6P7 765 aaPredicted RBP26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 POLR2MP0CAP2 368 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 XRCC5P13010 732 aaKnown RBP26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 CALML3P27482 149 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 GHRHRQ02643 423 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 CUL4AQ13619 759 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 SLC30A10Q6XR72 485 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 CCDC148Q8NFR7 591 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 AIFM3Q96NN9 605 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 APBA2Q99767 749 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 VPS54Q9P1Q0 977 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 PTPN22Q9Y2R2 807 aa26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.66■■□□□ 1.86
SMARCD1-203ENST00000547247 HSD17B4P51659 736 aa26.65■■□□□ 1.86
SMARCD1-203ENST00000547247 ZNF792Q3KQV3 632 aa26.65■■□□□ 1.86
SMARCD1-203ENST00000547247 FAM133AQ8N9E0 248 aa26.65■■□□□ 1.86
SMARCD1-203ENST00000547247 CUL5Q93034 780 aa26.65■■□□□ 1.86
SMARCD1-203ENST00000547247 DIS3Q9Y2L1 958 aaKnown RBP26.65■■□□□ 1.86
SMARCD1-203ENST00000547247 SMCO2A6NFE2 343 aa26.64■■□□□ 1.86
SMARCD1-203ENST00000547247 XBP1P17861 261 aa26.64■■□□□ 1.86
SMARCD1-203ENST00000547247 NPLOC4Q8TAT6 608 aa26.64■■□□□ 1.86
SMARCD1-203ENST00000547247 SYTL5Q8TDW5 730 aaPredicted RBP26.64■■□□□ 1.86
SMARCD1-203ENST00000547247 ALG1Q9BT22 464 aa26.64■■□□□ 1.86
SMARCD1-203ENST00000547247 RBBP6Q7Z6E9 1792 aaKnown RBP26.64■■□□□ 1.85
SMARCD1-203ENST00000547247 ESYT2A0FGR8 921 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 MRPL12P52815 198 aaKnown RBP26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 CNTN2Q02246 1040 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 FBXO46Q6PJ61 603 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 FAM177A1Q8N128 213 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 ZMYND12Q9H0C1 365 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 GLT8D2Q9H1C3 349 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 RIC8AQ9NPQ8 531 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 PTCH2Q9Y6C5 1203 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 HTTP42858 3142 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 HOXA13P31271 388 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 ADCY7P51828 1080 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 TEX2Q8IWB9 1127 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 FAM184AQ8NB25 1140 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 C6orf50Q9HD87 102 aa26.63■■□□□ 1.85
SMARCD1-203ENST00000547247 PIK3CDO00329 1044 aa26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 MEIS2O14770 477 aa26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 GNA11P29992 359 aa26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 NLRP5P59047 1200 aa26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 USP17L6PQ6QN14 398 aa26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 TRMT44Q8IYL2 757 aaKnown RBP26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 MAML3Q96JK9 1138 aa26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 ADD3Q9UEY8 706 aaKnown RBP26.62■■□□□ 1.85
SMARCD1-203ENST00000547247 ADCY3O60266 1144 aa26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 PXYLP1Q8TE99 480 aa26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 SHISA4Q96DD7 197 aa26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 PURBQ96QR8 312 aaKnown RBP26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 COL20A1Q9P218 1284 aa26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 SMC3Q9UQE7 1217 aa26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 KIF3AQ9Y496 699 aa26.61■■□□□ 1.85
SMARCD1-203ENST00000547247 SOWAHBA6NEL2 793 aa26.6■■□□□ 1.85
SMARCD1-203ENST00000547247 CCL14Q16627 93 aa26.6■■□□□ 1.85
SMARCD1-203ENST00000547247 ZNF467Q7Z7K2 595 aaPredicted RBP26.6■■□□□ 1.85
SMARCD1-203ENST00000547247 DNERQ8NFT8 737 aa26.6■■□□□ 1.85
SMARCD1-203ENST00000547247 ABHD8Q96I13 439 aa26.6■■□□□ 1.85
SMARCD1-203ENST00000547247 PLXNA1Q9UIW2 1896 aa26.6■■□□□ 1.85
SMARCD1-203ENST00000547247 OLFML2BQ68BL8 750 aa26.59■■□□□ 1.85
SMARCD1-203ENST00000547247 FCHSD1Q86WN1 690 aa26.59■■□□□ 1.85
SMARCD1-203ENST00000547247 SLAIN1Q8ND83 568 aa26.59■■□□□ 1.85
SMARCD1-203ENST00000547247 INTS4Q96HW7 963 aaKnown RBP26.59■■□□□ 1.85
SMARCD1-203ENST00000547247 FGD4Q96M96 766 aa26.59■■□□□ 1.85
SMARCD1-203ENST00000547247 TAAR1Q96RJ0 339 aa26.59■■□□□ 1.85
SMARCD1-203ENST00000547247 UBE2SQ16763 222 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 BICD2Q8TD16 824 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 RMDN3Q96TC7 470 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 GJB4Q9NTQ9 266 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 ELNP15502 786 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 GJB2P29033 226 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 GRK4P32298 578 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 TRIM29Q14134 588 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 GALNT17Q6IS24 598 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 MSL3Q8N5Y2 521 aaKnown RBP26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 NSUN6Q8TEA1 469 aaKnown RBP26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 TRIB2Q92519 343 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 PHF20Q9BVI0 1012 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 FLRT1Q9NZU1 646 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 KCNJ14Q9UNX9 436 aa26.58■■□□□ 1.85
SMARCD1-203ENST00000547247 ASTN1O14525 1302 aa26.57■■□□□ 1.84
SMARCD1-203ENST00000547247 ALDH5A1P51649 535 aaPredicted RBP26.57■■□□□ 1.84
SMARCD1-203ENST00000547247 MAMDC4Q6UXC1 1216 aa26.57■■□□□ 1.84
SMARCD1-203ENST00000547247 TINF2Q9BSI4 451 aa26.57■■□□□ 1.84
SMARCD1-203ENST00000547247 PCDHA4Q9UN74 947 aa26.57■■□□□ 1.84
SMARCD1-203ENST00000547247 LCTP09848 1927 aa26.57■■□□□ 1.84
SMARCD1-203ENST00000547247 CENPFP49454 3210 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms