RNA–Protein interactions for RNA: ENST00000546839.5

ERGIC2-203, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-203ENST00000546839 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 UBE2Q1Q7Z7E8 422 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 TRPV1Q8NER1 839 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 U2AF1L4Q8WU68 220 aaKnown RBP13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 KCNB2Q92953 911 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 MAML3Q96JK9 1138 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 DEFB118Q96PH6 123 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
ERGIC2-203ENST00000546839 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 TFRCP02786 760 aaKnown RBP13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 CAPN2P17655 700 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 CCND3P30281 292 aaPredicted RBP13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 KCTD2Q14681 263 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 TKFCQ3LXA3 575 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 PRAMEF19Q5SWL8 479 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 IFIT1BQ5T764 474 aaKnown RBP13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 CCDC174Q6PII3 467 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 STAG2Q8N3U4 1231 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 COL11A1P12107 1806 aaPredicted RBP13.69□□□□□ -0.22
ERGIC2-203ENST00000546839 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 ICAM1P05362 532 aa13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 EXOSC10Q01780 885 aaKnown RBP13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 TROAPQ12815 778 aa13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 RALYLQ86SE5 291 aaKnown RBP13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 FBXO40Q9UH90 709 aa13.68□□□□□ -0.22
ERGIC2-203ENST00000546839 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 PARP1P09874 1014 aaKnown RBP13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 ALAS1P13196 640 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 ADCK5Q3MIX3 580 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 ASPRV1Q53RT3 343 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 TMEM67Q5HYA8 995 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 CLEC4DQ8WXI8 215 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 FGD4Q96M96 766 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 OGDHLQ9ULD0 1010 aa13.67□□□□□ -0.22
ERGIC2-203ENST00000546839 MKI67P46013 3256 aaKnown RBP13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 PRC1O43663 620 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 CYBAP13498 195 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 TAL1P17542 331 aaPredicted RBP13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 DNAJB2P25686 324 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 MCM5P33992 734 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 WTAPQ15007 396 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 ANKRD35Q8N283 1001 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 VAT1LQ9HCJ6 419 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 A1CFQ9NQ94 594 aaKnown RBP13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 HOMER2Q9NSB8 354 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 RNF146Q9NTX7 359 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
ERGIC2-203ENST00000546839 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 LAMA4Q16363 1823 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 ERICH2A1L162 156 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 HSPA4P34932 840 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 LIFRP42702 1097 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 GRM4Q14833 912 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 RNF20Q5VTR2 975 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 TMEM87BQ96K49 555 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 NEK1Q96PY6 1258 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 PHOX2BQ99453 314 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 RIOX1Q9H6W3 641 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 ACAD9Q9H845 621 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 CYP39A1Q9NYL5 469 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 BRCA2P51587 3418 aa13.65□□□□□ -0.22
ERGIC2-203ENST00000546839 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
ERGIC2-203ENST00000546839 TRIM66O15016 1216 aa13.64□□□□□ -0.23
ERGIC2-203ENST00000546839 CYTH3O43739 400 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms