RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 STRNO43815 780 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 BMP15O95972 392 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 MAPK4P31152 587 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 PLS1Q14651 629 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 NONOQ15233 471 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 MOV10L1Q9BXT6 1211 aaKnown RBP18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 MORC2Q9Y6X9 1032 aaPredicted RBP18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 MGAMO43451 1857 aa18.31■□□□□ 0.52
PRPF40A-212ENST00000545856 SNAP25P60880 206 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 PKP1Q13835 747 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 MOXD1Q6UVY6 613 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 C17orf99Q6UX52 265 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 ZNF396Q96N95 335 aaPredicted RBP18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 GJB4Q9NTQ9 266 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 CFAP45Q9UL16 551 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 PCDHA6Q9UN73 950 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 PCDHA8Q9Y5H6 950 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 FRMPD4Q14CM0 1322 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 VEGFBP49765 207 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 XRRA1Q6P2D8 792 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 POTEEQ6S8J3 1075 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 RNF207Q6ZRF8 634 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 DNERQ8NFT8 737 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
PRPF40A-212ENST00000545856 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 B4DLN1 442 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 CFBP00751 764 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 GCFC2P16383 781 aaKnown RBP18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 ERCC3P19447 782 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 USP11P51784 963 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 CCAR1Q8IX12 1150 aaKnown RBP18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 GBP4Q96PP9 640 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 RIPK3Q9Y572 518 aa18.29■□□□□ 0.52
PRPF40A-212ENST00000545856 LCTP09848 1927 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 NFIBO00712 420 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 DTNBO60941 627 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 FCER1AP12319 257 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 SREBF1P36956 1147 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 FOSBP53539 338 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 KRT85P78386 507 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 NR5A1Q13285 461 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 CRHR2Q13324 411 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 KCTD2Q14681 263 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 NCAPG2Q86XI2 1143 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 ANO3Q9BYT9 981 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 A1CFQ9NQ94 594 aaKnown RBP18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 CYP39A1Q9NYL5 469 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 ADD3Q9UEY8 706 aaKnown RBP18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 CEP131Q9UPN4 1083 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 IVNS1ABPQ9Y6Y0 642 aa18.28■□□□□ 0.52
PRPF40A-212ENST00000545856 AOC2O75106 756 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 CYP3A4P08684 503 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 MAP2K1Q02750 393 aaPredicted RBP18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 GRM1Q13255 1194 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 MUM1L1Q5H9M0 696 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 NEK8Q86SG6 692 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 ANKRD35Q8N283 1001 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 OXER1Q8TDS5 423 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 SYTL5Q8TDW5 730 aaPredicted RBP18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 SCAND2PQ9GZW5 306 aaPredicted RBP18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 HOMER2Q9NSB8 354 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 RPTORQ8N122 1335 aa18.27■□□□□ 0.51
PRPF40A-212ENST00000545856 LAD1O00515 517 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 STAM2O75886 525 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 PPP4R3AQ6IN85 833 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 USP17L6PQ6QN14 398 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 NSMFQ6X4W1 530 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 TNPO1Q92973 898 aaKnown RBP18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 IWS1Q96ST2 819 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 DIS3Q9Y2L1 958 aaKnown RBP18.26■□□□□ 0.51
PRPF40A-212ENST00000545856 YEATS4O95619 227 aa18.25■□□□□ 0.51
PRPF40A-212ENST00000545856 Q3C1V9 767 aa18.25■□□□□ 0.51
PRPF40A-212ENST00000545856 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
PRPF40A-212ENST00000545856 NSUN6Q8TEA1 469 aaKnown RBP18.25■□□□□ 0.51
PRPF40A-212ENST00000545856 ZIC5Q96T25 663 aa18.25■□□□□ 0.51
PRPF40A-212ENST00000545856 MMP19Q99542 508 aa18.25■□□□□ 0.51
PRPF40A-212ENST00000545856 DNAJC25-GNG10A0A024R161 153 aa18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 CYP3A7-CYP3A51PA0A087WV96 503 aa18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 SLC15A5A6NIM6 579 aa18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 CYP3A7P24462 503 aa18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 CIITAP33076 1130 aa18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 NASPP49321 788 aaPredicted RBP18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 IRF5Q13568 498 aa18.24■□□□□ 0.51
PRPF40A-212ENST00000545856 BAATQ14032 418 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms