RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 RBPJLQ9UBG7 517 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 SEC63Q9UGP8 760 aaKnown RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 WDFY4Q6ZS81 3184 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 B4DLN1 442 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 ZBTB43O43298 467 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 MYCNP04198 464 aaPredicted RBP11.03□□□□□ -0.64
CIT-216ENST00000544872 RAG1P15918 1043 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 RPS6KB1P23443 525 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 MRPL12P52815 198 aaKnown RBP11.03□□□□□ -0.64
CIT-216ENST00000544872 SEC23AQ15436 765 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 RAB30Q15771 203 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 SNRNP48Q6IEG0 339 aaKnown RBP11.03□□□□□ -0.64
CIT-216ENST00000544872 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 ZNF654Q8IZM8 581 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 NKX2-4Q9H2Z4 354 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 SLC38A10Q9HBR0 1119 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 VAT1LQ9HCJ6 419 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 PDRG1Q9NUG6 133 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 FAM86C1Q9NVL1 165 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 TACC3Q9Y6A5 838 aa11.03□□□□□ -0.64
CIT-216ENST00000544872 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.64
CIT-216ENST00000544872 NAV1Q8NEY1 1877 aa11.02□□□□□ -0.64
CIT-216ENST00000544872 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
CIT-216ENST00000544872 ATP2A1O14983 1001 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 RGS2P41220 211 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 BTNL9Q6UXG8 535 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 Q6ZUG5 572 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 MCF2L2Q86YR7 1114 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 ANKRD35Q8N283 1001 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 PRSS33Q8NF86 280 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 RRP36Q96EU6 259 aaKnown RBP11.02□□□□□ -0.65
CIT-216ENST00000544872 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 GJD2Q9UKL4 321 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 CCPG1Q9ULG6 757 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 PRR12Q9ULL5 1215 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 PLXNA1Q9UIW2 1896 aa11.02□□□□□ -0.65
CIT-216ENST00000544872 PRRC2BQ5JSZ5 2229 aaKnown RBP11.01□□□□□ -0.65
CIT-216ENST00000544872 KLF18A0A0U1RQI7 1052 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 DNM1LO00429 736 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 CPLX1O14810 134 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 DCXO43602 365 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 GOLGA8HP0CJ92 632 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 SNHG28P0DPA3 235 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 ERCC3P19447 782 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 CNGA1P29973 690 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 SLC16A2P36021 539 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 RCAN1P53805 252 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 EXOSC10Q01780 885 aaKnown RBP11.01□□□□□ -0.65
CIT-216ENST00000544872 TMEM132BQ14DG7 1078 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 CCDC174Q6PII3 467 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 GPR142Q7Z601 462 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 FANCBQ8NB91 859 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 BRF1Q92994 677 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 MMP19Q99542 508 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 MOV10L1Q9BXT6 1211 aaKnown RBP11.01□□□□□ -0.65
CIT-216ENST00000544872 UBA5Q9GZZ9 404 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 MAF1Q9H063 256 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 ACAD9Q9H845 621 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 RAVER2Q9HCJ3 691 aaKnown RBP11.01□□□□□ -0.65
CIT-216ENST00000544872 MRPL11Q9Y3B7 192 aaKnown RBP11.01□□□□□ -0.65
CIT-216ENST00000544872 XIRP2A4UGR9 3374 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 MYH1P12882 1939 aa11.01□□□□□ -0.65
CIT-216ENST00000544872 RIF1Q5UIP0 2472 aaKnown RBP11□□□□□ -0.65
CIT-216ENST00000544872 USP34Q70CQ2 3546 aa11□□□□□ -0.65
CIT-216ENST00000544872 MYO5AQ9Y4I1 1855 aaKnown RBP11□□□□□ -0.65
CIT-216ENST00000544872 MYH7P12883 1935 aa11□□□□□ -0.65
CIT-216ENST00000544872 MED19A0JLT2 244 aaPredicted RBP11□□□□□ -0.65
CIT-216ENST00000544872 GOLGA8AA7E2F4 631 aa11□□□□□ -0.65
CIT-216ENST00000544872 GOLGA8BA8MQT2 603 aa11□□□□□ -0.65
CIT-216ENST00000544872 KBTBD13C9JR72 458 aa11□□□□□ -0.65
CIT-216ENST00000544872 CDKL5O76039 1030 aa11□□□□□ -0.65
CIT-216ENST00000544872 ICAM1P05362 532 aa11□□□□□ -0.65
CIT-216ENST00000544872 ALAS1P13196 640 aa11□□□□□ -0.65
CIT-216ENST00000544872 METAP2P50579 478 aaKnown RBP eCLIP11□□□□□ -0.65
CIT-216ENST00000544872 ANTXR2P58335 489 aa11□□□□□ -0.65
CIT-216ENST00000544872 GRM4Q14833 912 aa11□□□□□ -0.65
CIT-216ENST00000544872 RTN1Q16799 776 aa11□□□□□ -0.65
CIT-216ENST00000544872 Q3C1V9 767 aa11□□□□□ -0.65
CIT-216ENST00000544872 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
CIT-216ENST00000544872 MFSD14CQ5VZR4 134 aa11□□□□□ -0.65
CIT-216ENST00000544872 MICU3Q86XE3 530 aa11□□□□□ -0.65
CIT-216ENST00000544872 FBXO11Q86XK2 927 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms