RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 STAT3P40763 770 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 RIOX2Q8IUF8 465 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 SHCBP1Q8NEM2 672 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 NCOA7Q8NI08 942 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 DCAF4Q8WV16 495 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 KCNB2Q92953 911 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 TOX2Q96NM4 488 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 UBA5Q9GZZ9 404 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
TMEM258-205ENST00000540434 PRRC2BQ5JSZ5 2229 aaKnown RBP13.36□□□□□ -0.27
TMEM258-205ENST00000540434 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 PLA2G6O60733 806 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 SEC24BO95487 1268 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 RAB30Q15771 203 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 CCDC96Q2M329 555 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 CCDC174Q6PII3 467 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 PPP1R12CQ9BZL4 782 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
TMEM258-205ENST00000540434 ISY1Q9ULR0 285 aaKnown RBP13.35□□□□□ -0.27
TMEM258-205ENST00000540434 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
TMEM258-205ENST00000540434 PRC1O43663 620 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 PGK2P07205 417 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 STAT2P52630 851 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
TMEM258-205ENST00000540434 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
TMEM258-205ENST00000540434 PPIGQ13427 754 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM258-205ENST00000540434 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
TMEM258-205ENST00000540434 ABRAQ8N0Z2 381 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 CHURC1Q8WUH1 139 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 FBXL18Q96ME1 805 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 MYL10Q9BUA6 226 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 SNX14Q9Y5W7 946 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 MTCH2Q9Y6C9 303 aa13.34□□□□□ -0.27
TMEM258-205ENST00000540434 BAZ2BQ9UIF8 2168 aaKnown RBP13.33□□□□□ -0.28
TMEM258-205ENST00000540434 EPOPA6NHQ4 379 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 ATP2A1O14983 1001 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 ZBED4O75132 1171 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 RARBP10826 455 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 HSPA4P34932 840 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 TROAPQ12815 778 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 TRDNQ13061 729 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 TSGA10IPQ3SY00 556 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
TMEM258-205ENST00000540434 RNF180Q86T96 592 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 FAM160B2Q86V87 743 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 RAB11FIP4Q86YS3 637 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 HERVK_113Q902F9 699 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 PURBQ96QR8 312 aaKnown RBP13.33□□□□□ -0.28
TMEM258-205ENST00000540434 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
TMEM258-205ENST00000540434 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 NRBP1Q9UHY1 535 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
TMEM258-205ENST00000540434 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
TMEM258-205ENST00000540434 PALM3A6NDB9 673 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 PRR33A8MZF0 331 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 ZNF865P0CJ78 1059 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 CCSAPQ6IQ19 270 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 FGD4Q96M96 766 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 NEK1Q96PY6 1258 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 TSEN34Q9BSV6 310 aaKnown RBP13.32□□□□□ -0.28
TMEM258-205ENST00000540434 TEX13BQ9BXU2 312 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 MROH8Q9H579 483 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 STARD7Q9NQZ5 370 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 HOMER2Q9NSB8 354 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
TMEM258-205ENST00000540434 LCTP09848 1927 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 CYTH3O43739 400 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 SLC25A27O95847 323 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 RXRAP19793 462 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 CYP2C18P33260 490 aa13.31□□□□□ -0.28
TMEM258-205ENST00000540434 CDK7P50613 346 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms